Gene Bcen2424_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4311 
Symbol 
ID4452652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1253455 
End bp1254696 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content69% 
IMG OID639696367 
Productmajor facilitator transporter 
Protein accessionYP_837938 
Protein GI116692405 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.481156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC CGGCAGCGGG CGTGTTCCGC TCGCTTCGCA GCTTCAACTA CCGCGTATGG 
GCGATCGGCT CGCTGGTGTC GAACATCGGT ACGTGGATCC AGCGCACCGC GCAGGACTGG
CTCGTCCTGA CGCAGCTCAC GCATCACGAC GCATCGGCCG TCGGCACGGT GATGGCGCTG
CAGTTCGGGC CGCAACTGCT GCTGTTGCCG TGGACCGGCT ACGCGGCCGA CCGCTTCGAC
CAGCGCAAGC TGCTGATGGC GACGCAGGCG CTGATGGGGG CGCTGGCGCT CGTGCTCGGC
GTGCTGACGG TCACCGGTGC GGTGCGGCTC GAGCACGTGT ATGTATTCGC GTTCCTGTTC
GGCTGCGCGT CGGCGTTCGA CGCGCCGGTG CGGCAGACTT TCGTCGCGGA ACTGGTCGGC
GACCGCGAAC TCGCGAACGC AGTCGCGCTC AACTCGACGT CGTTCAATGC CGCGCGGATG
GTCGGCCCGG CGGCGGCCGG CTTCCTGATC GCATCGGTCG GCACCGGCTG GGCGTTTCTC
GCGAACGGTC TCAGCTTCTT CGCGGTGCTG GCGTCGCTGT CGCGGCTTCG GGAGGACGAA
CTGCGCACCA ATGTGCGGGC AAGCCGCTCG CGCGGCAGCC TGCTCGACGG ATTCCGTTAC
GTGTGGCGCC GGCCGGACCT CACAGCCATC CTCGTGATGC TGTTCCTGAT CGGCACGTTC
GGGCTGAATT TCCAGTTGTT CATTTCGACG ATGGCCGCCA GCGTGTTTCA CGTCGATGCG
CGTGGGTTCG GTTTCCTGTC GTCGATGATG GCGGTCGGCA CGATCTCGGG CGCGCTGCTC
GCCGCGCGCC GCGAGCAGCC GCGTTTCCGT CATCTGTGGA TCGGCGCGGC GCTGTTCGGG
CTCGGCTGCA CGTTCGCCGC GCTGGCGCCC GGCTACTGGT CGTTCGCCGC CGCGCTGGTG
CTGACCGGCG TCGCCGCGAT CACCTTCATG AACTCGACCA ACAGCCTGAT GCAGCTTTCC
ACCGAGCCGG CGATGCGCGG CCGCGTGATG GCGCTGCGTC TCGCGGTCGC ATTGGGCGGC
ACGCCGATCG GCGCGCCGGT GGCCGGCTGG GTCGCGAACC ATCTCGGCCC GCGCTGGGCG
CTCGGCCTCG GCGCGGCGTC CGGCTTTGCC GCGGCGCTCG TCGCGACCCA TTTCGTCACG
CGCAAGCGAG CGCAGCCCCG CGCATCCGAC GACGGGGCCT GA
 
Protein sequence
MSVPAAGVFR SLRSFNYRVW AIGSLVSNIG TWIQRTAQDW LVLTQLTHHD ASAVGTVMAL 
QFGPQLLLLP WTGYAADRFD QRKLLMATQA LMGALALVLG VLTVTGAVRL EHVYVFAFLF
GCASAFDAPV RQTFVAELVG DRELANAVAL NSTSFNAARM VGPAAAGFLI ASVGTGWAFL
ANGLSFFAVL ASLSRLREDE LRTNVRASRS RGSLLDGFRY VWRRPDLTAI LVMLFLIGTF
GLNFQLFIST MAASVFHVDA RGFGFLSSMM AVGTISGALL AARREQPRFR HLWIGAALFG
LGCTFAALAP GYWSFAAALV LTGVAAITFM NSTNSLMQLS TEPAMRGRVM ALRLAVALGG
TPIGAPVAGW VANHLGPRWA LGLGAASGFA AALVATHFVT RKRAQPRASD DGA