Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4311 |
Symbol | |
ID | 4452652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1253455 |
End bp | 1254696 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696367 |
Product | major facilitator transporter |
Protein accession | YP_837938 |
Protein GI | 116692405 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.481156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGC CGGCAGCGGG CGTGTTCCGC TCGCTTCGCA GCTTCAACTA CCGCGTATGG GCGATCGGCT CGCTGGTGTC GAACATCGGT ACGTGGATCC AGCGCACCGC GCAGGACTGG CTCGTCCTGA CGCAGCTCAC GCATCACGAC GCATCGGCCG TCGGCACGGT GATGGCGCTG CAGTTCGGGC CGCAACTGCT GCTGTTGCCG TGGACCGGCT ACGCGGCCGA CCGCTTCGAC CAGCGCAAGC TGCTGATGGC GACGCAGGCG CTGATGGGGG CGCTGGCGCT CGTGCTCGGC GTGCTGACGG TCACCGGTGC GGTGCGGCTC GAGCACGTGT ATGTATTCGC GTTCCTGTTC GGCTGCGCGT CGGCGTTCGA CGCGCCGGTG CGGCAGACTT TCGTCGCGGA ACTGGTCGGC GACCGCGAAC TCGCGAACGC AGTCGCGCTC AACTCGACGT CGTTCAATGC CGCGCGGATG GTCGGCCCGG CGGCGGCCGG CTTCCTGATC GCATCGGTCG GCACCGGCTG GGCGTTTCTC GCGAACGGTC TCAGCTTCTT CGCGGTGCTG GCGTCGCTGT CGCGGCTTCG GGAGGACGAA CTGCGCACCA ATGTGCGGGC AAGCCGCTCG CGCGGCAGCC TGCTCGACGG ATTCCGTTAC GTGTGGCGCC GGCCGGACCT CACAGCCATC CTCGTGATGC TGTTCCTGAT CGGCACGTTC GGGCTGAATT TCCAGTTGTT CATTTCGACG ATGGCCGCCA GCGTGTTTCA CGTCGATGCG CGTGGGTTCG GTTTCCTGTC GTCGATGATG GCGGTCGGCA CGATCTCGGG CGCGCTGCTC GCCGCGCGCC GCGAGCAGCC GCGTTTCCGT CATCTGTGGA TCGGCGCGGC GCTGTTCGGG CTCGGCTGCA CGTTCGCCGC GCTGGCGCCC GGCTACTGGT CGTTCGCCGC CGCGCTGGTG CTGACCGGCG TCGCCGCGAT CACCTTCATG AACTCGACCA ACAGCCTGAT GCAGCTTTCC ACCGAGCCGG CGATGCGCGG CCGCGTGATG GCGCTGCGTC TCGCGGTCGC ATTGGGCGGC ACGCCGATCG GCGCGCCGGT GGCCGGCTGG GTCGCGAACC ATCTCGGCCC GCGCTGGGCG CTCGGCCTCG GCGCGGCGTC CGGCTTTGCC GCGGCGCTCG TCGCGACCCA TTTCGTCACG CGCAAGCGAG CGCAGCCCCG CGCATCCGAC GACGGGGCCT GA
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Protein sequence | MSVPAAGVFR SLRSFNYRVW AIGSLVSNIG TWIQRTAQDW LVLTQLTHHD ASAVGTVMAL QFGPQLLLLP WTGYAADRFD QRKLLMATQA LMGALALVLG VLTVTGAVRL EHVYVFAFLF GCASAFDAPV RQTFVAELVG DRELANAVAL NSTSFNAARM VGPAAAGFLI ASVGTGWAFL ANGLSFFAVL ASLSRLREDE LRTNVRASRS RGSLLDGFRY VWRRPDLTAI LVMLFLIGTF GLNFQLFIST MAASVFHVDA RGFGFLSSMM AVGTISGALL AARREQPRFR HLWIGAALFG LGCTFAALAP GYWSFAAALV LTGVAAITFM NSTNSLMQLS TEPAMRGRVM ALRLAVALGG TPIGAPVAGW VANHLGPRWA LGLGAASGFA AALVATHFVT RKRAQPRASD DGA
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