Gene Bcen2424_4291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4291 
Symbol 
ID4452314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1229491 
End bp1231002 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content73% 
IMG OID639696348 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_837919 
Protein GI116692386 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCC GCGTGCACCC GGCCGCGATC GGCGCCGTGG CGATCGTCGC GGCCGCGGTG 
CTCGCCGGCT GCACGGTCGG CCCGGATTAC CGGCGCCCGC CCGTCGATAC GCCGGCCGCG
TGGCGGCTCG ACCCGGCCGA CGCATACTGG CAGCCGGCCG CGCCGGCCCG CGCGCCGCTC
GATCCCGCCT GGTGGACCGC GTTCGGCGAC GCCCAGCTCG ACGCACTGGA AGCCGACGCG
CTGCGCAACA ACCAGAACCT GAAGGCGATG GCCGCGCGCT ACGACCAGGC GAAGGCGACG
CTCGCGTCGG TGGCGTCCGC GCAGTATCCG GCCGTCGGGC TGAACGCAAG CGGCCAGCGC
TTCAAGATCT CCGCCGACCG GCCGCAGACC AACTACGCGA CGCAGAGCAT GTCGACCGTG
CAGAACGACA TCCAGGTGGG CGCGGCGGTC AGCTACGAAC TCGACCTGTT CGGCCGCGTG
CGGCGCAACG TCGAAGCCGC GCAGGCCAGC ACCGAGCAGT CGCGTGACGA TTTCGCAAAC
GCGCGCCTCG TGCTGAGCGC CGACCTCGCG TCGAGCTATT TCACGCTGCG CGAGCTCGAC
ACCGAGATCG ACGTCGTCAA GCGCTCGATC GACCTGCAAC AGAAGGCGCT CGATTACGTC
AGCGCGCGCC ACGACCTCGG CGCGGTGTCG GGCCTCGACC TGTTGCAGCA GCGCGCGCAG
CTCGACGCGA CCCGCACGCA GGCGCAATTG CTGATCCAGC AACGCGCGCA GGTCGAAACC
GCGATCGCGA CGCTGGTCGG TACGCCGGCT CCCGCCTTCT CGCTGCCGCC GCGCGTGGTG
CCGATCAACG CGCCCGCGCT GCCGACCGGG ATGCCGAGCG ACCTGCTGCA GCGGCGCCCC
GACGTCGCGT CGGCCGAGCG CGCGATGGCC GCCGCGAACG CGCAGATCGG CGTCGCGCGC
GCCGCGTATT TCCCGCGTAT CACGCTGTCG CCGGACATCG GCTGGGACGC GACCCGCTTC
GCGGGCCTGT TCACCGTGCC GGCACTGCTG TGGTCGGTTG GCGGCTCGCT CAGCCAGCCG
CTGTTCGAGG GCGGCAAGCT GAAGGCCGGC GTCGATTTCG CGCAGGCCGG CTACGTCGCC
GCGCAGGCCA GCTACCGGCA GACCGTGCTC ACCGCGTTCC AGGAGGTGCA AAATGCGGTG
ACCGGCCTGT CGGTGCTCGC GCAGGCCGCG CAGCAGGCTT CCGCGGCCGT CGACGACGCG
CGCAAGCTCG TATCGCTTGC GCAGGACCGC TACGCGGGCG GCCTGACGCC GTTCATCGAC
GTGCTGACGG CCCAGCAGCA GTTGCTGACG AGCGAGCGCC AGGCCGTGCA GATCCAGGGC
CAGCGCGCGG CGCTCGTGGT GTTTCTCGCG AAGGCGCTCG GCGGCGGCTG GGACGGCGAT
GCGGCGAGCG GCCTGGCGCC GTCCGACGTC GCGTCGGCGG CCCCGCAGCG CGGCGCGGGT
GTCGGCCCTT GA
 
Protein sequence
MRPRVHPAAI GAVAIVAAAV LAGCTVGPDY RRPPVDTPAA WRLDPADAYW QPAAPARAPL 
DPAWWTAFGD AQLDALEADA LRNNQNLKAM AARYDQAKAT LASVASAQYP AVGLNASGQR
FKISADRPQT NYATQSMSTV QNDIQVGAAV SYELDLFGRV RRNVEAAQAS TEQSRDDFAN
ARLVLSADLA SSYFTLRELD TEIDVVKRSI DLQQKALDYV SARHDLGAVS GLDLLQQRAQ
LDATRTQAQL LIQQRAQVET AIATLVGTPA PAFSLPPRVV PINAPALPTG MPSDLLQRRP
DVASAERAMA AANAQIGVAR AAYFPRITLS PDIGWDATRF AGLFTVPALL WSVGGSLSQP
LFEGGKLKAG VDFAQAGYVA AQASYRQTVL TAFQEVQNAV TGLSVLAQAA QQASAAVDDA
RKLVSLAQDR YAGGLTPFID VLTAQQQLLT SERQAVQIQG QRAALVVFLA KALGGGWDGD
AASGLAPSDV ASAAPQRGAG VGP