Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4262 |
Symbol | |
ID | 4452215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1198036 |
End bp | 1199103 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696319 |
Product | squalene/phytoene synthase |
Protein accession | YP_837890 |
Protein GI | 116692357 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0172457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.1857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCC ATACCGATCC CGCCTATCTG CTCGGCGAAC TGCTGAAGAA CGTTTCCCGC TCCTTCTACC TGACGCTGCG CGTGCTGCCC GACGGCATGC GCGACCCGGT CGGCCTCGCG TATCTGCTCG CGCGCGCGGC CGACACGATC GCCGACACGG CGCTCGTCGC GCCTGATCGC CGCGCGGCGC TGCTGACCGA CCTGCGCGAC GACATCGAAC GGCTCGGCGA TGGCGCGGCG CTGTCGCGTT CGCTCGAGGA CGTGACGCGG ATGCAGACCG ATTCGCACGA ACACCTGCTG CTCGGTTCGA TGGAGCCGAT GCTCGCGCTG CTGCGCGCGC AGCCGGAGGC CGATCGCGCG TCGATCCGCA AGGTCGTCGC GACGCTCACC GCGGGGATGG AGTTCGACCT GCGCACGTTT CCGCACGAGC AGTCGGGGCA GGTCGCATCG CTGCCGACGC GCGACGTGCT CGACCGCTAC ACGTACCTGG TCGCCGGCTG CGTCGGCGAG TTCTGGACCG ACATGACGGG CGCGCACACG CGTGCCGCGC GCGGCTGGGA TCTGTCGGAC ATGCGCGAGA AGGGAATCCG TTTCGGCAAG GCGCTGCAGA TGACCAACAT CCTGCGCGAC TGCGCGAAGG ATCTGCGCAT CGGCCGCTGC TACCTGCCCG ACGACGTGCT GGGCGCACAC GGGCTCGTGG TGGCCGACCT GATGCAGCCA GAAGCATCGG AACGTGCGCG CGGCGTGCTG GTCGACCTGC TGCGCGTCGC GCTCGACCAG TATCGCGACG CCTACCTGTA TACGCTCGCG ATTCCGCGTC GTTTCGTGCG GCTGCGGCTC GCCTGCCTGT GGCCGATCAT GATCGGCCTC GAAACGCTCG AACTGCTGGC CGGCCACGCG GCGTGGCTCG ACCCGGCGAA GCCGGCCAAG GTGCCGAGAA AGCGCGTCTA CCGGATCATG GCGGCGTCGC TCGCGCTGGT CGGCTCGAAC ACGGCGGTCC GTTCGCGTCT GACCGCGCTC GCCGATGCGG TGACCGCGCG GCTCGCGCGC CCCGCGACGC AGCTCTGA
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Protein sequence | MTTHTDPAYL LGELLKNVSR SFYLTLRVLP DGMRDPVGLA YLLARAADTI ADTALVAPDR RAALLTDLRD DIERLGDGAA LSRSLEDVTR MQTDSHEHLL LGSMEPMLAL LRAQPEADRA SIRKVVATLT AGMEFDLRTF PHEQSGQVAS LPTRDVLDRY TYLVAGCVGE FWTDMTGAHT RAARGWDLSD MREKGIRFGK ALQMTNILRD CAKDLRIGRC YLPDDVLGAH GLVVADLMQP EASERARGVL VDLLRVALDQ YRDAYLYTLA IPRRFVRLRL ACLWPIMIGL ETLELLAGHA AWLDPAKPAK VPRKRVYRIM AASLALVGSN TAVRSRLTAL ADAVTARLAR PATQL
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