| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4139 |
|---|
| Symbol | |
|---|
| ID | 4453007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1049940 |
|---|
| End bp | 1050860 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639696197 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_837768 |
|---|
| Protein GI | 116692235 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.405813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.104892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCA AAGCCATTCA ATGGACCGGG GTTTTCCCGG CCGTCAGCAC CCAGTTCAAG
CCGGACTTTT CCCTCGACAT CGACGCCACG CACCGCGTGG TCAAGAACCT GGTGAACGAC
GGCGTGTCGG GCCTCGTGGT CTGCGGCACG GTCGGCGAAA ACACGTCGCT GTCGACGAGC
GAGAAGCTCC AGGTGATCGA GGCCGCGCGC GACGCGGCCG GCGGCAAGAT TCCGGTGATC
GCCGGCATCG CCGAATTCAC GACCGAATTC GCGCGCAACA CGGTGCGCGA AGCGCAGCGC
GTCGGCGTCG ACGGCGTGAT GGTGATGCCC GCGCTCGTCT ACTCGGCGAA GCCGCACGAA
ACCGCCGCGC ACTTCCGCGC GGTCGCGACG AGCACCGACC TGCCGGTGAT GGTCTACAAC
AACCCGCCGA TCTACAAGAA CGACGTGACG CCCGACGTGC TGATCGCGCT GCAGGATTGC
GAGAACATCG TCTGCTTCAA GGATTCGTCG GGCGATACGC GCCGCTTCAT CGACCTGCGC
AATGCGGTCG GCGATCGCTT CGTACTGTTC GCGGGCCTCG ACGACGTCGT GGTCGAGAGC
ATCGCGGTCG GCGCCGAAGG CTGGGTGTCG GGCATGTCGA ACGCGTTCCC GAAGGAAGGC
GAGACGCTGT TCCGCCTCGC GAAGCAAAAG CGCTTCGACG AAGCGCTCGC GCTGTATCGC
TGGTTCATGC CGCTGCTGCA CCTCGACGCA CGCCCCGACC TCGTGCAGTG CATCAAGCTG
TGCGAGGAGC TGGTCGGCCG CGGCAGCGCG ATCACGCGTC CGCCGCGCCT CGCGCTGCAA
GGCGACACGC TCGCGGAAGT GAAGGCCATC GTCGCGAAGG CGCTCGAAAC GCGCCCGGCG
CTGCCCGACG TCGGTCTCTG A
|
|---|
| Protein sequence | MSRKAIQWTG VFPAVSTQFK PDFSLDIDAT HRVVKNLVND GVSGLVVCGT VGENTSLSTS
EKLQVIEAAR DAAGGKIPVI AGIAEFTTEF ARNTVREAQR VGVDGVMVMP ALVYSAKPHE
TAAHFRAVAT STDLPVMVYN NPPIYKNDVT PDVLIALQDC ENIVCFKDSS GDTRRFIDLR
NAVGDRFVLF AGLDDVVVES IAVGAEGWVS GMSNAFPKEG ETLFRLAKQK RFDEALALYR
WFMPLLHLDA RPDLVQCIKL CEELVGRGSA ITRPPRLALQ GDTLAEVKAI VAKALETRPA
LPDVGL
|
|---|
| |