| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4103 |
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| Symbol | |
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| ID | 4452703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1000711 |
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| End bp | 1002804 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639696161 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_837732 |
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| Protein GI | 116692199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.871871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.778137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA GACGGACCTT CATGTGCGGA TGCCTCGGCA CGTTTGCCGC CTGTTCGCTG
TTCCCGGGCG TGACCGGCGC CAAGATGATC GATCTGCTGC CGCCGTCCGA TCCGGCCGAC
GGCAAGACGT TTCGCGTGAT CTGCATGCAC GACGTGCGCG ACAACCTGAT GGCGTCGTTC
TCGTCGCCGA CCGCGATCAT CGATCCGTTC GCGGTCGATA CCGGCACGCT GACCGCGATC
TTCTCGTGGC TGCAGACCAA CAACTACCAC ACCATCACGG TCAAGCAGAT CGAAGAGTCG
CGCCGCGGCG GCAAGCCGCT GCCGCCGCGC TCCGTGCTGC TCACGTTCGA CGACGGCTTC
CGCAGCCACT ACACGAAAGT GCTGCCGCTG CTCGAGCGCT TCAAGTATCC GGCCGTGATG
GGCCTCGTCA CCGCGTGGAT CGACACGCCG CCGGATACGC CGATCCGCAT CAGCGACAAG
GTGCAAGTGC CGCGCGACTA CTTCCTGTCG TGGGACGAGG TGAAGAAGCT CGGCCAGTCT
GAATTCGTCG AGCTCGGCTG CCACACCCAC AATCTCCACC ATGGCGCGGT CGCGAATCCG
CAAGGCAACG AGCTGCCGGC GACCACGTCG CATCTCTACC TGCAAGATCA GAAACGCTAC
GAGACCGACG CCGAGTTCCA CGCCCGCGTG CACGACGACC TGCAGACGTG CGTGCGGCAG
ATCCGCGAAC GCACCGGTAT CGTCGCGCGC TCGATGGTGT GGCCGTACGG CGCGGAAAAC
CAGCCCGTGC GCCAGATCTC GACGTCGCTC GGCATGGACG TCCAGTTCAG CCTCGATGCC
GGCCCGAATA CGCCGGACGT GCCGCTCGAC CGACTGAGAC GGATTCTGAT GATGTACGAC
GTCGACATCG GCGGGTTCGA GCGCTCGATG CGCGAACCGG CGTCGAACCG CGGCGACGTC
GACGTGCCCG AGCGCACCGT GCAGGTCGAT CTCGACCAGG TCTACGATCC CGATCCCGCA
CGGCAGGAAG CGAATCTCGG CAAGCTGATC GAGCGCATCT ACCGGATGCA GCCGAAATCG
GTGTACCTGC AGGCGTTTGC GGACCCGAAG GGCACGGGCG TGGCCGAAGC GGTGTATTTC
CCGAACCGGC ACCTGCCGAT GCGTTCCGAC CTGTTCTCGC GTGCCGCGTG GCAACTCAAT
ACGCGCGCCA ACGTACAGGT GTACGCGTGG ATGCCGGTGC TCGCGTTCCG GCCGTCCCCC
GACAAGCTCC GCTCGCTCCA GGCCGTGAGC GCGTTCGGCG GTGCGCCGGC TAGAGAGAAC
GGCACGCGCG TGTTCCGGCT GAGTCCGTTC GATCCCGATG CGCGGCTGAT GATCCAGCAG
ATCTACGAGG ATCTCAGCAA GCACGCGTCG TTCAGCGGCA TCCTGTTCAG CGACGACGCG
GTGCTCGACG ACTACGAGGA TGGGGGCCGG CATGCGCTGC GCACCTATTC GCAATGGGGG
TTGCCGGCCG ACATCGGCAA GATCCGCGAG AACCCCGACC TGATGAAACG CTGGACGCGC
CAGAAGACGC GCTACCTGAT CGACATGACC CGGCAACTCG AGCAGATCGT GCTGGCGCAC
CAGAACGTCG GCGACGTGCT GACCGCGCGC AACATCTTCG CGATGCCGGT GCTCAAGCCC
GAATCGGAAG CGTGGTTCGC GCAGAACTAC GACGATTTCC TCGCCGCCTA CGACTACGTC
GCGCTGATGG CGATGCCGTA CATGGAACAG GCGAAAGACC CGGAAGGCTG GCTGGACCAG
CTCGTGAAGG CCGTACGCGC GAAGCAGCGT GGGCTGCAGC GCACCGTGTT CGAACTGCAG
GCATACGACT GGCACGGGCA GAAGGCGGTG CCGGCCGGCA CGCTGCTCGC GCAGATGCGG
CGGCTGCGCA GCGAGGGCGC CGTGAATTTC GGCTACTACC CCGACAACTT CCTGAACGGC
CAGCCGGAAC TCGACGCGAT GCGCGACGTG ATGTCGCTGA AATCGCGCCT CGACCCCACC
TCGATCAACG CGCTGATGCA GATGCAGCAC TCGCAGGGAA CCAAGACACC ATGA
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| Protein sequence | MQSRRTFMCG CLGTFAACSL FPGVTGAKMI DLLPPSDPAD GKTFRVICMH DVRDNLMASF
SSPTAIIDPF AVDTGTLTAI FSWLQTNNYH TITVKQIEES RRGGKPLPPR SVLLTFDDGF
RSHYTKVLPL LERFKYPAVM GLVTAWIDTP PDTPIRISDK VQVPRDYFLS WDEVKKLGQS
EFVELGCHTH NLHHGAVANP QGNELPATTS HLYLQDQKRY ETDAEFHARV HDDLQTCVRQ
IRERTGIVAR SMVWPYGAEN QPVRQISTSL GMDVQFSLDA GPNTPDVPLD RLRRILMMYD
VDIGGFERSM REPASNRGDV DVPERTVQVD LDQVYDPDPA RQEANLGKLI ERIYRMQPKS
VYLQAFADPK GTGVAEAVYF PNRHLPMRSD LFSRAAWQLN TRANVQVYAW MPVLAFRPSP
DKLRSLQAVS AFGGAPAREN GTRVFRLSPF DPDARLMIQQ IYEDLSKHAS FSGILFSDDA
VLDDYEDGGR HALRTYSQWG LPADIGKIRE NPDLMKRWTR QKTRYLIDMT RQLEQIVLAH
QNVGDVLTAR NIFAMPVLKP ESEAWFAQNY DDFLAAYDYV ALMAMPYMEQ AKDPEGWLDQ
LVKAVRAKQR GLQRTVFELQ AYDWHGQKAV PAGTLLAQMR RLRSEGAVNF GYYPDNFLNG
QPELDAMRDV MSLKSRLDPT SINALMQMQH SQGTKTP
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