| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4049 |
|---|
| Symbol | |
|---|
| ID | 4453266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 942379 |
|---|
| End bp | 943338 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696107 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837678 |
|---|
| Protein GI | 116692145 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0950657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATG CCACCGAGCC GGTTTCCGGC AACCTGAACT GGGACGACCT GCGCTTTTTC
CTCGAAGTCG CGCGCACGCA GCGCGCGAGC GGCGCCGCGA AGCGGCTCGG GGTCGACTAC
ACGACCGTCG CGCGGCGCAT CCGCGCGCTC GAGGCCGCGA TGGGCACGCT GCTGTTCGAC
AAGTCGCGCT CGGGCGGCTT CACGCTGACG GCCGAAGGGC AACGGCTCGT CGCGTATGCG
GACGCGATGG AGACGACCGT GCAATCCGCG TGCGATCAGG TCGCGAACAC CGGCGAGGCG
CTGTCGGGCC ACGTGCGGAT CGGGTCGACC GAAGGGTTCG GCTGCTTTTT CCTCGCCCCG
CAGCTCGCGC GGTTCCGCGC CGCGCATCCG CACGTGACGG TCGACCTGCT GCCGGTGCCG
CATTTCGTCA ACCTGCCCAA GCGCGAGGCC GATCTCGCGA TCACGCTCGA ACGGCCCGAG
CGCGGGCCTT ACGTGGTCAC GAAGCTGTGC GACTACCAGT TGCGGCTCTA TGCGACGCAC
GACTATCTGG CGACCCACCC GCCGATCACG TGCACCGACG ATCTCGCGCG GCACGCGTTC
ATCAGCTACG TCGACGATCT CGCGTTCAGT AACGAACTGC TGTACCTGGA CCGCGCGGTG
CCCGGCGCGA CGGCGGGCTT GCGCACGACC AGCGTGATCG CGCAGGTTTT CGCGGCGCTG
CAGGGTGGCG GCCTGGCGAT CCTGCCGTGC TTCATGGCGG CCACGCAGCC GGCGCTGGTG
CCCGTGCTGC CGAACGACGT GGTCGTCACG CGGTGTTTCT GGCTGACGTG CCGCGAGGAT
CTGCGCAAGC TGCGGCGCGT GACCGCGCTG TGGGACTACC TGCGCGCGGC GGCAGACGCG
AATCGCGCGT TGCTGTCGGG GGAATCGGCT ACGCTGCGCT TCGTCGGCGA GCCGGAGTAG
|
|---|
| Protein sequence | MRHATEPVSG NLNWDDLRFF LEVARTQRAS GAAKRLGVDY TTVARRIRAL EAAMGTLLFD
KSRSGGFTLT AEGQRLVAYA DAMETTVQSA CDQVANTGEA LSGHVRIGST EGFGCFFLAP
QLARFRAAHP HVTVDLLPVP HFVNLPKREA DLAITLERPE RGPYVVTKLC DYQLRLYATH
DYLATHPPIT CTDDLARHAF ISYVDDLAFS NELLYLDRAV PGATAGLRTT SVIAQVFAAL
QGGGLAILPC FMAATQPALV PVLPNDVVVT RCFWLTCRED LRKLRRVTAL WDYLRAAADA
NRALLSGESA TLRFVGEPE
|
|---|
| |