| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3990 |
|---|
| Symbol | |
|---|
| ID | 4453087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 880265 |
|---|
| End bp | 881320 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639696048 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_837619 |
|---|
| Protein GI | 116692086 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA ATACCCACGA TGTATCGGTT CTCGTCACGG GCGGCACCGG CTTCATTGCA
CAACACTGCA TCCTGGCGCT GCTGAATCGA GGCTATCAGG TACGCACCAC CGTTCGCTCG
CTCGCACGCG AGACGCAGGT GCGCGCACAG CTCGAAAGAG GCGGCGCGGA ACCCGGAGGC
CGTCTGTCAT TCGTCGAGGC GGATCTCCTC GCCGACGACG GCTGGCAACA GGCCACTGCC
GGCTGCACCT ACGTCGTACA TGGCGCGTCG CCCACGCCCA CCGGCACGCA GACGAGCGAA
GACGACTGGG TCAAGCCCGC CGTGGCAGGC ACGCTGCGTG TGCTGCGTGC GGCGCGGGAC
GCCGGCGTCA AGCGCGTCGT GCTGACCTCC GCTTTCGGCG CGATCTGCGC CGGGCATGGG
CCAATGCGCC GCCCCTTCGA CGAGACCGAC TGGAGCAACC TGGCGGCCGC CGATGTCTGG
CCTTATCAGA AGTCGAAGAC CTTGTCGGAG CGCGCGGCCT GGGATTTCGT CGCGCGAGAA
GGACGCGGCA TGCAACTGTC CGCGATCAAT CCGGTGACGG TTCTCGGCCC CGTGCTCGGC
GACGACTATT CGCATTCCAT CCGCCTGATC AGGGGCATGC TGGACGGCCA GCCCGGCAAT
CCGCGAATCA ATTCCGGCTT CGTCGACGTG CGCGATGTCG CCGACCTGCA TGTGCGAGCC
ATGACCCACG AAGCCGCGGA CGGCGAGCGC TTCATTGCCA TTGCAGGCGA AAGCATGTGG
CTCGCCGAAG TCGCGCAAGT GCTCAAGGCG CGCATGGGGG ACGCCGCGCG CCATGTGTCG
ACCCGGGTGC TGCCCGACTG GCTGGTACGC ATCGGCGCGC TCAGGGATCC CGCGCTGCGC
GGATCGCTGC CGCTGCTCGG CCGCAATCTG AACGCCACCA GCCAGAAGGC CATCAGCTTG
CTCGGCTGGT CGCCCCGCCC GCGCGAGGAC GCCATCGTCG CCACGGCCGA AAGCCTCGTG
CGCCTCGGGC TACTGCGCGA TGCCGGCCGG CGATAG
|
|---|
| Protein sequence | MNSNTHDVSV LVTGGTGFIA QHCILALLNR GYQVRTTVRS LARETQVRAQ LERGGAEPGG
RLSFVEADLL ADDGWQQATA GCTYVVHGAS PTPTGTQTSE DDWVKPAVAG TLRVLRAARD
AGVKRVVLTS AFGAICAGHG PMRRPFDETD WSNLAAADVW PYQKSKTLSE RAAWDFVARE
GRGMQLSAIN PVTVLGPVLG DDYSHSIRLI RGMLDGQPGN PRINSGFVDV RDVADLHVRA
MTHEAADGER FIAIAGESMW LAEVAQVLKA RMGDAARHVS TRVLPDWLVR IGALRDPALR
GSLPLLGRNL NATSQKAISL LGWSPRPRED AIVATAESLV RLGLLRDAGR R
|
|---|
| |