Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3981 |
Symbol | |
ID | 4452606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 867970 |
End bp | 869127 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639696039 |
Product | porin |
Protein accession | YP_837610 |
Protein GI | 116692077 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.886193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TTGCTCTCTC GACCCTCTCG CTCGCCCTGC TGGGCGCGGC CGGCGCTGCT CAAGCTCAGT CGAGCGTCAC GCTGTACGGC GTGATCGACA CGTCGATCAC CTATGTTCAC GGTAACGATG GTCAAGGTAA CAATTCGTGG TCGATGGGTA GCGGCAACCT GCAAGGCAGC CGCTTCGGCC TGAAGGGTTC GGAAGACCTC GGTGGCGGCC TGAAGGCGAT CTTCCAGTTG GAAAACGGCT TCAACTCGGC ATCGGGCGCA CTGGGCCAGG GTGGCCGCAT GTTCGGTCGT CAAGCCTTCG TCGGCCTGCA AAGCGACCAG TACGGTACGC TGACGCTGGG TCGCCAGTAC GACCCGCTGG TCGACCTGGT CCAGGCAGTC ACGGCTGACA ACTACTTCGG CAGCGTGTTC GCCACGCCGG GTGACGTCGA CAACAACGAC AACAGCCTGC GCGTCAGCAA CGCGATCAAG TACACGTCGC CGGTCTGGGC AGGCCTCCAG GTCGAAGCGC TGTACGCACT CGGCGGCGTC GCCGGCTCGA CCGGCAAGGG TCAGACGTGG GCGGCAGCGG CAGCGTACAA CAACGGCCCG CTCGGCCTGG CTGCAGGTTA CTTCCACGCG AACAACTCGG CTCCGCTGAG CGCAGTTGGC CAGCGCACCG GCTGGGCCGG CACGTCGGAC GCGATCTTCG ACGGCTCGGG TAACTTCATC AACAACGCGT ACACGTCGGC ATCGTCGATC GGCATCGCGC AAGTCGCTGG CCAGTACGCA TTCGGCCCGG TGACGTTCGG CCTCGGCTAC AGCAACGCGC AATACAAGGC GGATGCGAAC TCGGGCTTCG GCACGAACCA GAAGTACAAC ACGGGTCGCG CATTCGTCAC GTACCAGGCA TCGGCACCGC TGCTGCTGGG CGTCGGCTAC ATCTACACGA AGGGCAGCGG CCAGACGGAC GCCAAGTACC ACCAGGTTTC GCTCGGCGCG GACTACTCGC TGTCGAAGCG TACGGACATC TACCTGGTTG GCGCGTACCA GCACGCAAGC GGCAAGAACG CCGACGGTAC CGATGCGCAA GCGTCGGTCG GCTCGTACGG CATCGCCGGC AAGAGCTCGC AGGAAATCGT CGCACTCGGC CTGCGTCACA AGTTCTAA
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Protein sequence | MKKLALSTLS LALLGAAGAA QAQSSVTLYG VIDTSITYVH GNDGQGNNSW SMGSGNLQGS RFGLKGSEDL GGGLKAIFQL ENGFNSASGA LGQGGRMFGR QAFVGLQSDQ YGTLTLGRQY DPLVDLVQAV TADNYFGSVF ATPGDVDNND NSLRVSNAIK YTSPVWAGLQ VEALYALGGV AGSTGKGQTW AAAAAYNNGP LGLAAGYFHA NNSAPLSAVG QRTGWAGTSD AIFDGSGNFI NNAYTSASSI GIAQVAGQYA FGPVTFGLGY SNAQYKADAN SGFGTNQKYN TGRAFVTYQA SAPLLLGVGY IYTKGSGQTD AKYHQVSLGA DYSLSKRTDI YLVGAYQHAS GKNADGTDAQ ASVGSYGIAG KSSQEIVALG LRHKF
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