Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3958 |
Symbol | |
ID | 4452494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 839181 |
End bp | 840374 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639696017 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_837588 |
Protein GI | 116692055 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.196954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.187601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAACC TTCCTGATGA TCGCGGCCAT TTCGGCCCGT ATGGCGGCGT GTTCGTCGCC GAGACGCTGA TTCACGCGCT GGACGAACTG CGCGCGGCGT ATGAAAAGTT CCAGAACGAT CCCGACTTCG TCGCCGAATT CGAGCGCGAG CTGAAGTATT TCGTCGGCCG CCCGTCGCCG ATCTATCACG CGCAGCGCTG GAGCGAGATG CTCGGCGGCG CGCAGATCTA CCTGAAGCGC GAAGACCTGA ACCACACGGG TGCGCACAAG ATCAACAACG TGATCGGCCA GGCGCTGCTC GCGAAGCGCA TGGGCAAGAA GCGCGTGATC GCGGAAACGG GCGCCGGCCA GCACGGCGTC GCGACCGCGA CGATCTGCGC GCGCTTCGGG ATGGAGTGCG TCGTCTACAT GGGCTCGGAG GACGTGCGCC GGCAGGCCGC GAACGTCTAC CGGATGAAGC TGCTGGGCGC GACCGTCGTG CCGGTCGAAT CGGGTTCGCG CACGCTGAAG GACGCGCTGA ACGAAGCGAT GCGCGACTGG GTCACGAATA TCGAAAGCAC GTTCTACATC ATCGGCACGG TCGCGGGCCC GCACCCGTAC CCGATGATGG TGCGCGACTT CCAGCGCGTG ATCGGTGACG AGTGCAAGGT GCAGATGCCC GAGCTCGCCG GCCGCCAGCC GGACGCGGTG ATCGCGTGCG TCGGCGGCGG GTCGAACGCG ATGGGCATCT TCTATCCGTA CATCGACGAT ACCTCGGTGC AACTGATCGG CGTCGAAGCG GCCGGCGACG GCCTCGACAC GGGCCATCAC GCTGCCTCGC TGATCGCCGG CAGCCCCGGC GTGCTGCACG GCAACCGCAC GTACCTGCTG CAGGACGACA ACGGCCAGAT CATCGAGACG CATTCGGTGT CGGCGGGCCT CGATTATCCG GGCGTCGGTC CCGAGCACGC ATGGCTGAAG GACAGCGGCC GCGCGCAGTA CGTGCCGATC ACCGACGCGG AAGCGTTGAA GGCGTTTCAC GACTGCTGCC GGATCGAGGG GATCATTCCC GCGCTCGAGT CGAGCCACGC GATCGCGTAC GGCGTGAAGC TCGCGCCGAC GTTGCCGAAG GACAAGCTCC TGCTCGTCAA CCTGTCGGGC CGCGGCGACA AGGACATGCA CACGGTCGCC GAGCGATCGG GCATCGAGCT CTGA
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Protein sequence | MYNLPDDRGH FGPYGGVFVA ETLIHALDEL RAAYEKFQND PDFVAEFERE LKYFVGRPSP IYHAQRWSEM LGGAQIYLKR EDLNHTGAHK INNVIGQALL AKRMGKKRVI AETGAGQHGV ATATICARFG MECVVYMGSE DVRRQAANVY RMKLLGATVV PVESGSRTLK DALNEAMRDW VTNIESTFYI IGTVAGPHPY PMMVRDFQRV IGDECKVQMP ELAGRQPDAV IACVGGGSNA MGIFYPYIDD TSVQLIGVEA AGDGLDTGHH AASLIAGSPG VLHGNRTYLL QDDNGQIIET HSVSAGLDYP GVGPEHAWLK DSGRAQYVPI TDAEALKAFH DCCRIEGIIP ALESSHAIAY GVKLAPTLPK DKLLLVNLSG RGDKDMHTVA ERSGIEL
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