Gene Bcen2424_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3940 
Symbol 
ID4452059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp819370 
End bp820347 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID639695999 
ProductAraC family transcriptional regulator 
Protein accessionYP_837570 
Protein GI116692037 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC AATACGAGCA CGTGACGTTT GCGTCCGGCT GCTCCATCCG CGTCTATCAC 
CGCCAGCTCG CGCGCATTCC GTTCGAATGG CATCGCCACC CCGAGTACGA GCTGACGCTG
ACGCTCAACA GCCGCGGCCA GCGCTTCATC GGCGACCACG TCGCGCGTTA CGCGGACGAC
GATCTCGTGC TCGTGCCGCC GAACCTGCCG CATACGTGGT CGTCGAACGC GCGCATCGAT
CGCGACGCGC CCGAGGTCGC GCTCGTCGTC TGGTTCGACG GAGACTGGAT GCGGCGGCTG
GCCGACTGCT GCCCCGAATA CGCGCCGCTG CGCTCGCTGT TGCGACGTGC GGCGCCGGGC
CTGCACTTCG ACGTGGAGAC GGCCCGCGCG ATGCGCGCGC GGCTGCCGCG GTTGCTCGAT
CCGTCGCCGC GCGTGCGGCT CGCGGCCACG CTCGACACGC TTGCCGATCT CGCGGAAACA
GGCGGCGAAC CGCTCGCCAC CGCGCAGGCG TACGACCTGG CCGATGGCGC GCCGTCGCCC
GCCGACCCGG CCGCCCCCGA AGCCGAACGC CTCGACCGCG TGCTCGACGC GATCGACCGG
CATTTCCACG AACCGCTGCG CATCGACGCC CTCGCCGCCG TCGCGCACCT GTCCGAACGC
ACACTGCAAC GGCTGTTCGT CCGGCATCTC GGCGAAAGCG TCGGCCGCTA CGTGCAGCGG
CTGCGGCTCG CGCACGCGTG CCGCCATCTC GTCGGCACCG ACTGGCCGAT CGCGACGGTG
GCCGCGCGCT GCGGCATTCC GAATACCGCG AACTTCAATC GCCAGTTCCT CGCCGCGCGC
GGCACGACGC CCGGCGCATA CCGGCAGTTC TTCAAGCAGC ATGGCCATGC ACCCGACGGC
GATGCGCCCG CGCTCGACAC ACGGCCACCG TCGCTGGAGC ACCGCGGCGG ATCGGGCCAA
CGTCGGCCGC ACAAATGA
 
Protein sequence
MKPQYEHVTF ASGCSIRVYH RQLARIPFEW HRHPEYELTL TLNSRGQRFI GDHVARYADD 
DLVLVPPNLP HTWSSNARID RDAPEVALVV WFDGDWMRRL ADCCPEYAPL RSLLRRAAPG
LHFDVETARA MRARLPRLLD PSPRVRLAAT LDTLADLAET GGEPLATAQA YDLADGAPSP
ADPAAPEAER LDRVLDAIDR HFHEPLRIDA LAAVAHLSER TLQRLFVRHL GESVGRYVQR
LRLAHACRHL VGTDWPIATV AARCGIPNTA NFNRQFLAAR GTTPGAYRQF FKQHGHAPDG
DAPALDTRPP SLEHRGGSGQ RRPHK