| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3881 |
|---|
| Symbol | |
|---|
| ID | 4451940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 745437 |
|---|
| End bp | 746477 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695939 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_837511 |
|---|
| Protein GI | 116691978 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.1504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTTC TCGGCATCGA AAGCTCCTGC GACGAAACCG GCCTCGCGCT CTACGACACG
CAGCGCGGCC TGCTCGCGCA CGCGCTCCAT TCGCAGATCG CGATGCATCG CGACTACGGC
GGCGTCGTAC CCGAGCTCGC ATCGCGCGAC CATATCCGCC GCGCGCTGCC GCTGCTCGAG
GAAGTGATGG CGCAAAGCGG CACGCGCCGC GACGACATCG ACGCGATCGC GTTCACGCAG
GGCCCCGGCC TCGCCGGCGC GCTGCTGGTC GGCGCGAGCA TCGCGAATGC ACTCGCGCTC
GCGTGGAACA AGCCGACCGT CGGCATCCAT CACCTCGAAG GCCACCTGCT GTCGCCGTTG
CTGGTCGACG AGCCGCCGCC GTTCCCGTTC GTCGCGCTGC TGGTTTCCGG CGGCCACACG
CAACTGATGC GCGTGACCGA CGTCGGCGTG TACGAGACGC TCGGCGAAAC GCTCGACGAC
GCGGCCGGCG AAGCGTTCGA CAAGACGGCG AAACTGATCG GCCTCGGTTA CCCGGGCGGC
CCCGAAGTAT CGAAGCTGGC CGAAACGGGC ACGCCGGGCG CGGTCGTGCT GCCGCGCCCG
ATGCTGCATT CGGGCGATCT CGACTTCAGC TTCAGCGGCC TGAAGACGGC CGTGCTTACG
CAGATGAAGA AATTCGAGGC GGCGAAGCTC GACGGCGAAG CCCTCGAACG CGCGAAGGCC
GACCTGGCAC GCGGCTTCGT CGATGCGGCC GTCGACGTAC TCGTCGCGAA GTCGCTCGCA
GCGCTGAAGA AGACGAAGCT CAAGCGCCTC GTGGTCGCGG GCGGCGTCGG CGCGAACCGC
CAGTTGCGCG CGGCACTGTC GGCGGCCGCG GCCAAGCGCG GCTTCGACGT GCACTACCCC
GATCTCGCGC TCTGCACCGA CAACGGCGCG ATGATCGCCC TCGCGGGCGC GCTGCGGCTC
GGCCGCTGGC CGGAACAGGC GAATGCCGAC TACGCGTTCA CGGTGAAGCC GCGCTGGGAT
CTCGCGTCGC TCGCGGGCTG A
|
|---|
| Protein sequence | MLVLGIESSC DETGLALYDT QRGLLAHALH SQIAMHRDYG GVVPELASRD HIRRALPLLE
EVMAQSGTRR DDIDAIAFTQ GPGLAGALLV GASIANALAL AWNKPTVGIH HLEGHLLSPL
LVDEPPPFPF VALLVSGGHT QLMRVTDVGV YETLGETLDD AAGEAFDKTA KLIGLGYPGG
PEVSKLAETG TPGAVVLPRP MLHSGDLDFS FSGLKTAVLT QMKKFEAAKL DGEALERAKA
DLARGFVDAA VDVLVAKSLA ALKKTKLKRL VVAGGVGANR QLRAALSAAA AKRGFDVHYP
DLALCTDNGA MIALAGALRL GRWPEQANAD YAFTVKPRWD LASLAG
|
|---|
| |