| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3828 |
|---|
| Symbol | |
|---|
| ID | 4451767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 693466 |
|---|
| End bp | 694650 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639695886 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_837458 |
|---|
| Protein GI | 116691925 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.146208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAATCG CGATCGTCAC GCACGTCGTG CGACATAACG ACGGGCAGGG CCGCGTCAAT
TACGAAATCG CGCGCGCGGC GCTGGCCGAG AACTACGAGG TCACGCTGGT CGCGTCGCAC
GTCGCGCCCG AACTGCTGGC CGACCCGCGC GTGCGCTGGG TGCCGGTGAA GGTCGGCGGC
TTCTGGCCGT CGAATCTCGT CAAGCAGCAG GTGTTCGCGC TGAAGAGCGC GGCCTGGCTG
CGCGCGCACC GCGGTGAATA CGACGTACTG CACGTGAACG GCTTCATCTC GTGGATCAAG
GCCGACGTCA ATACCGCGCA CTTCGTGCAC GGCGGCTGGT TCAAGAGTCC GTACTATCCG
TTCGGGCCCG CGAAGGGGCT GTGGTCGGCC TACCAGTACG TCTACACGCG CGTGAATACC
GTGCTCGAGC GCTGGGCGTA CAAGCGTTCG CGCGCGATCA CCGCCGTGTC GCAAAAGGTG
GCCGACGAGA TCGCCGGGCT CGGCATCGAC AGCCGCAAGA TCAGCGTGAT CTACAACGGT
GTGGACGGCA GCGCATTCGC CGGCGCGCAG GCCGATCGCG CGGCGTTCAA GCTGCCGGAC
GACGCGTTCC TGCTGCTGTT CGTCGGCGAC CTGCGCACGC CGCGCAAGAA CCTCGGCACC
GTGCTGAAGG CGCTGACGAA GCTGCCCGCC AACGTGCATC TGGCGGTGGC CGGCTATCTG
CCCGGCAGCC CGTATCCGGA GGAGGCGCGC GCGCTCGGCA TCGATTCGCG CGTGCATTTC
CTCGGGCTCG TGAAGAACAT GCCGACGCTG ATGCGCTCGG TCGACGCGTA TGTCTTTCCG
TCGCGCTACG AAGCGATGAG CCTGTCGCTG CTGGAGGCGA TGGCGGCCGG GCTGCCGGTC
GTCACCGCGC GCACGGCGGG CGGCGCGGAA ATCATCACGC GCGAATGCGG GATCGTGCTG
GAGGACCCGG ACGATCCGGC CGCGCTCGCG CAGGCGATCG GCGCGCTCGC GGCGTCGCGC
GACACCTGCC GCGCGATGGG CGACGCGGCC CGCGAACTGA TGACCCGTTT CGGCTGGGCG
CACATGGGCG CCCAGTACGT CGCGCTTTAC CGGCGCATCG GCCAACCCAC GCAGCCGTCC
GCCTTCGAGC GGGTCGAGCA TGCAATCACG CAGGAGCAAC CGTGA
|
|---|
| Protein sequence | MRIAIVTHVV RHNDGQGRVN YEIARAALAE NYEVTLVASH VAPELLADPR VRWVPVKVGG
FWPSNLVKQQ VFALKSAAWL RAHRGEYDVL HVNGFISWIK ADVNTAHFVH GGWFKSPYYP
FGPAKGLWSA YQYVYTRVNT VLERWAYKRS RAITAVSQKV ADEIAGLGID SRKISVIYNG
VDGSAFAGAQ ADRAAFKLPD DAFLLLFVGD LRTPRKNLGT VLKALTKLPA NVHLAVAGYL
PGSPYPEEAR ALGIDSRVHF LGLVKNMPTL MRSVDAYVFP SRYEAMSLSL LEAMAAGLPV
VTARTAGGAE IITRECGIVL EDPDDPAALA QAIGALAASR DTCRAMGDAA RELMTRFGWA
HMGAQYVALY RRIGQPTQPS AFERVEHAIT QEQP
|
|---|
| |