Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3823 |
Symbol | |
ID | 4451762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 686342 |
End bp | 687505 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639695881 |
Product | polysaccharide export protein |
Protein accession | YP_837453 |
Protein GI | 116691920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.87104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG TGGCGCTTGC CGTCGCGCTG ACGACTTTCC TGTCAGCCTG TGCAACCGCG CCCGGCAACT ACCTCGACTC GTCGAACCTG AAGGACGAAG GCCGGCAGGA AGCGGCCGAA ACCTATCCGG TTCATTACAT CGACGCCAAA GTGGTGATGG ACCAGCTGCA GAAAGCGCAG GTCGATCATC CGCTGCCGCC CGGGCGCTAT ACCGATCCGT CGCAGTACAC GTATCGCGTC GGCCCGCAGG ACATCCTCGG CGTCACCGTG TGGGACCACC CGGAGCTGAC GACGCCGCAG GGCCAGTCGT TCTCGAGCGG CGGCAACACG ACGCAATCGG TCGCGGGCGC GCTGCAGCAG CCGTATACGA CCGCGCTGCC GGGCCAGGCC GATCCGTACG GCCAGACGGT CGCCGCCGAC GGCACGATCT TCTTCCCGTT CGTCGGCCGC ATCCGCGTGG CGGGCAAGAC GGTCGCGCAG ATCCGCGACG AGATGGCGTC CAGCCTGTCG CGCTACGTGA AGAATCCGCA GCTCGACGTG CGCGTGCTGT CGTTCCGCAG CCAGAAGGTA CAGGTGACGG GCGAGGTGAA GCAGCCGGGC CCGCTCGCGG TGAGCGACGT GCCGCTCACG CTCGTCGACG CGATCTCGCG CTCCGGCGGC TCGACCGCCG AGGCCGACCT GCAGCGCGTG CGCCTGACGC GCGACGGCAA GCTCTACACG CTCGACGCGA ACGGCGTGCT CGATCGCGGC GAAGTGAAGC AGAACGTGAT GCTGCAGCCG GGCGACATCG TCAACGTGCC GGACCGCAGC GACAGCCGCG TGTTCATCAT GGGCGAGGTC AAGACGCCGG TCACGGTGCC GATGCTCAAG GGCAAGCTGA CCATCGCCGA TGCGCTGACC GCGGGCGGCG GGATTCTCGA CACCGACGCG AACCCGCGCA AGATCTACGT GATGCGCGGG ATGCGCGACA ACCCGACGAA GCCCGAGGTG TACCGCCTCG ACATGACGCA GCCCGATGCG CTGATGCTGT CGAGCCGCTT CCCGCTTCAA CCGCTCGACG TCGTCTACGT CAGCACGGCC GGTTCGGTGC AGTTCAACCG TGTGCTGCAG CAGGTGCTGC CGACGATCCA GACGATCTTC TACATGCGGC AAATCACGCG CTGA
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Protein sequence | MRPVALAVAL TTFLSACATA PGNYLDSSNL KDEGRQEAAE TYPVHYIDAK VVMDQLQKAQ VDHPLPPGRY TDPSQYTYRV GPQDILGVTV WDHPELTTPQ GQSFSSGGNT TQSVAGALQQ PYTTALPGQA DPYGQTVAAD GTIFFPFVGR IRVAGKTVAQ IRDEMASSLS RYVKNPQLDV RVLSFRSQKV QVTGEVKQPG PLAVSDVPLT LVDAISRSGG STAEADLQRV RLTRDGKLYT LDANGVLDRG EVKQNVMLQP GDIVNVPDRS DSRVFIMGEV KTPVTVPMLK GKLTIADALT AGGGILDTDA NPRKIYVMRG MRDNPTKPEV YRLDMTQPDA LMLSSRFPLQ PLDVVYVSTA GSVQFNRVLQ QVLPTIQTIF YMRQITR
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