| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3798 |
|---|
| Symbol | |
|---|
| ID | 4452290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 660195 |
|---|
| End bp | 661076 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695856 |
|---|
| Product | Dyp-type peroxidase family protein |
|---|
| Protein accession | YP_837428 |
|---|
| Protein GI | 116691895 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.262927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.114512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG TTCAGCAAGG CATCCTGGCT CCGATCGATA CGGCAGCCCG ATACCTCACT
TTCACGATGT CGAATGACGG CAATATCGCC GCGGCGCTGG CCGCGCTGCG CGAGATCGTC
GACGGACGCG ACACGGTCGT CGGGTTCGGA CACGCGCTGG CCGCCTGGCT CGGGCATTCG
GTGCCGGGCC TGACCGAGTA CCCGGCGTTC GCGGTGAACG ACCGCACGCT GCCGAGGACG
CCGGCCGACG TGTGGGTCTG GCTGCGCTCG GACGACCGCG GCGAGATCGT ACTGCGCGCG
CGGGAGATCG AACGCGCGCT CGCGCCGGCG TTCACGCTGC AGGAGGCCGT CGACGGCTTC
CGCTATTCGA ACGATCGCGA CCTGTCCGGC TACGAGGACG GCACCGAGAA CCCGGAAGGC
GACGACGCGG TGGCCGCGGC GATCGTGACG GGGCAGGGCG CGGGGCTCGA CGGCTCGAGC
TTCGTCGCGG TGCAGCAGTG GGTACACGAC TTCGACCAGA TGGAGCGCAT TCCGTCGGGC
GAGATGGATC ACATCATCGG GCGCCGCCGT TCGGACAACG AGGAACTCGA CGACGCACCC
GAATTCGCGC ACGTGAAGCG CACCGCGCAG GAAAGCTTCG AGCCCGAGGC GTTCATGCTG
CGCCGTTCGT CGCCGTGGTC GGACACGCGC CGCGCGGGCC TGTACTTCGT CGCGTTCGGC
TGCTCGTTCC GCGCGTTCGA CGTGCAGATG CGCCGGATGA GCGGCGCGGA AGACGGCATC
GTCGACGGCC TGTTCCGCTT CACGCGGCCG CTGACGGGCG CGTATTTCTG GTGCCCGCCG
ATGAAGGACG GCAAGCTGGA CCTCGCCGCG CTGGGACTGT AA
|
|---|
| Protein sequence | MSDVQQGILA PIDTAARYLT FTMSNDGNIA AALAALREIV DGRDTVVGFG HALAAWLGHS
VPGLTEYPAF AVNDRTLPRT PADVWVWLRS DDRGEIVLRA REIERALAPA FTLQEAVDGF
RYSNDRDLSG YEDGTENPEG DDAVAAAIVT GQGAGLDGSS FVAVQQWVHD FDQMERIPSG
EMDHIIGRRR SDNEELDDAP EFAHVKRTAQ ESFEPEAFML RRSSPWSDTR RAGLYFVAFG
CSFRAFDVQM RRMSGAEDGI VDGLFRFTRP LTGAYFWCPP MKDGKLDLAA LGL
|
|---|
| |