Gene Bcen2424_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3786 
Symbol 
ID4451750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp646050 
End bp647726 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content68% 
IMG OID639695844 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_837416 
Protein GI116691883 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.170694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.253027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG TGACGCCCCG CGCGACCAAT GAAAGCCTGC ATCCGACGAT CGGCGCTGCC 
CGGCTGACGC TCGGCAATCG CATCCTGCTC AGCTTCGGCG TGCTGTTCGT GCTGATGCTG
GTGACAGCCG GCGTGTCGTA CGAGCGACTG CGCGCGATCA ACGCCGAAGC CGTCAGCATC
GAGCGCGACT CGTTGCCCGG CGTCTACCTC GCGTCATCGC TGCGCGCGGC GGTCAACGAA
ACGTTCGTCA TGCTGCAGCA GGCGACCTTC GTCGAGACCG ACCCCGACGC CGTGCAGCGC
GATCTCGCGA AGATCGCGGA CGCGACGAAG CAGGTCGAAT CGCTGTCGGT CGACTACCAG
GCGTCGATCT TCCGCGACGA CGACCGTGCG CGTTTTGCGA CGTTTCGCGG CGCATACGAT
CGCTACCTGC CGCTGTTGAC CGACGCGGTA CAGAGGCACC GCGGCTCGCG CGACGAAGCG
ATCGCCGCCT ACGCGAAGGT GTTGCCGGGG TGGGCCGAGG TCGTGCAGGA CGCGAACATC
ATGGTCCAGG AGAACCGCAA GTTCGCGGAC CAGTCCGCGA GGGTGATCCG CGAATCCGTG
CAGGACGCGG AAGTCGTGCT CGTCGGCGCG CTGACGATCA TGCTGCTGTC CGCGCTCGGG
CTCGGCTACA TGCTGTACCG CTCGGTCACC GTGCCGATGG CGCGGCTCGT CGAGGTGCAC
GACGTGATGC GCACCGGCAA CCTGACCCAT CGCCTCGATC TGCGCCGCCG CGACGAATTC
GGCACGCTCG AAACCGGCTT CAACCGGATG GCCGACGAGC TGACCGAGCT GGTCGCGCGC
GCGCAGCAGT CGTCGATGCA GGTGACGACG TCGGTGGCCG AGATCGCGGC GACGTCGCGC
GAACAGCAGG CGACCGCGAA CGAGACCGCG GCGACGACGA CCGAGATCGG CGCGACCTCG
CGCGAGATCT TCGCGACGTC GCGCGACCTG CTGCGCACGA TGAACGAAGT GGCCGGCGTG
GCCGAGCAGT CGGCGACGCT CGCGGGCGTG AGCCAGAGCG GGCTCACGCG AATGGGCGAG
ACGATGCGCA GCGTGATGGA CGCGGCCGGC TCGGTGAACG CGAAGCTCGC GATCCTCAAC
GAGAAGGCGC TGAACATCAA CCAGGTGGTC GCGACGATCA CCAAGGTGGC CGACCAGACC
AACCTGCTGT CGCTGAACGC GGCGATCGAG GCCGAGAAGG CCGGCGAGTA CGGCCGCGGC
TTCGCGGTCG TCGCGACCGA GATCCGCCGC CTGGCCGACC AGACGGCGGT GGCGACCTAC
GACATCGAGC AGACGGTCAA GGAAATCCAG TCGGCCGTGT CGGCAGGCGT GATGGGGATG
GACAAGTTCT CCGAGGAAGT ACGCCGCGGG ATGCTCGACG TGCAGCAGGT CGGCGGGCAG
CTGTCGCAGA TCATCGCCGA GGTGCAGACC CTCGCGCCGC GCTTCCAGAT GGTCAACGAA
GGGATGCAGA CGCAGGCGAA CGGCGCCGAG CAGATCACGC AGGCGCTGTC GCAACTGTCG
GAAGCCGCGC AGCAGACGGC CGAGTCGCTG CGCCAGTCGT CGCAGGCGAT CGACGATCTG
ACGCTCGTCG CGAACCAGTT GCGCACCAGC GTGTCGCGCT TCAAGGTCGA CGCGTGA
 
Protein sequence
MATVTPRATN ESLHPTIGAA RLTLGNRILL SFGVLFVLML VTAGVSYERL RAINAEAVSI 
ERDSLPGVYL ASSLRAAVNE TFVMLQQATF VETDPDAVQR DLAKIADATK QVESLSVDYQ
ASIFRDDDRA RFATFRGAYD RYLPLLTDAV QRHRGSRDEA IAAYAKVLPG WAEVVQDANI
MVQENRKFAD QSARVIRESV QDAEVVLVGA LTIMLLSALG LGYMLYRSVT VPMARLVEVH
DVMRTGNLTH RLDLRRRDEF GTLETGFNRM ADELTELVAR AQQSSMQVTT SVAEIAATSR
EQQATANETA ATTTEIGATS REIFATSRDL LRTMNEVAGV AEQSATLAGV SQSGLTRMGE
TMRSVMDAAG SVNAKLAILN EKALNINQVV ATITKVADQT NLLSLNAAIE AEKAGEYGRG
FAVVATEIRR LADQTAVATY DIEQTVKEIQ SAVSAGVMGM DKFSEEVRRG MLDVQQVGGQ
LSQIIAEVQT LAPRFQMVNE GMQTQANGAE QITQALSQLS EAAQQTAESL RQSSQAIDDL
TLVANQLRTS VSRFKVDA