Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3754 |
Symbol | |
ID | 4453039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 612629 |
End bp | 614203 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639695812 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_837384 |
Protein GI | 116691851 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.118599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCG CGTTTTCCGG CGACCCCGCG TCGCAACCGA CCAAACAGCG CGTGTTCGCG TTCGCGCTGA TGTGCGTCGG CTTCTTCATG GCGACGCTCG ACATCCAGAT CGTCGCGTCG TCGCTGCGCG ACATCGGCGG CGGGCTGTCC GCGAGCCAGG ACGAACTGTC GTGGGTGCAG ACCGCGTACC TGATCGCCGA GATCATCGTG ATCCCGATGT CGGGCTGGCT GTCGAAGGTG ATGTCGACCC GCTGGCTGTT CGCCGCGTCG GCCGTCGGCT TCACGATCAC CAGCATGCTG TGCGGGCTCG CGTGGGACAT CAACTCGATG ATCCTGTTTC GCGGGCTGCA GGGCGCGCTC GGCGCCGCGA TGATCCCGAC CGTGTTCACC ACCGCGTTCG TGCTGTTCCC CGGCAGGCAG CGGCTGATCG CGTCGACGAC CATCGGCGCG CTCGCGTCGC TCGCGCCGGC GATCGGCCCC GTGATCGGTG GCTGGATCAC CGACCAATGG TCATGGCACT GGCTGTTCTA CCTGAACCTC GTGCCGGGCA TCGCGGTGGC CGTGCTCGTG CCGCGCTACG TGCATATCGA CGCGCCCGAT CTCAGCCTGA TCAAGCGCGG CGACTATCTC GGCATCCTGC TGATGTCCGG CTTCCTCGGC TGCCTCGAGT ACGTGCTCGA GGAAGGCCCG CGCAAGAACT GGTTCGGCGA CGATGCGATC GTGATCTGCG CGTGGATCTC CGGCATCTGC GGCTTCCTGT TCATCGTGCA TGCGCTGACC GCGAAAGACC CGATCGTCGA CCTGCGCGCG CTGGCCGTGC GCAACTTCGG GATCGGCAGC CTGCTGTCGT TCGTGACCGG CATCGGCATC TTCGTGACCG TGTTCCTGAC GCCGCTGTTT CTCGCGCAGG TGCGTGCGTT CAGCTCGCTG CAGATCGGTA TCGCGCTGCT GTCGGTCGGC GCGTTCCAGT TGATCGCGCT GTGTGCGTAT GCGTTCGCCG CGCGCTACGT CAGCATGCGT GCGCTGCTCG TGTTCGGGCT GATCTGCTTC GGCCTCGGCT GCTACCTGTA CACGCCGATC ACACACGACT GGGGCTGGCA GGAACTGCTG CTGCCGCAGG CGCTGCGCGG CATCGGCCAG CAGTTCAGCG TGCCGCCGAT CGTGACGATG GCGCTCGGCT CGCTGCCGCA ATCGCGCCTG AAATCGGCGA GCGGGTTGTT CAACCTGATG CGTAACCTCG GCGGCGCGAT CGGTATCGCC GTGAGCGCGA CGATGCTCAA CGACCGGCTG AATTTTCACT ATCTGCGCCT GAACGAGCAC GTGAGCGCCG GCGAGCCGCA GGTCGCGTCG CTGCTCGATC GCCAGGCCGC GTACTGGGGA TCGGTGGCAG GCAATACGCT GAACACCGCG CAGGCCGGGC TCGCGAACTT GCATCGGCTG ATCTATCGCG AAGCGCTCAC GTTGACCTAT GCGGATGCGT ACTACGCGCT ATCGCTGTGC TTCGTCGTCG CGCTGCTTGC CGTCGTGTTT TCCAAACCCA TTACGTTGAA CGCGCCGCCG CCGGACGCGC ACTGA
|
Protein sequence | MTTAFSGDPA SQPTKQRVFA FALMCVGFFM ATLDIQIVAS SLRDIGGGLS ASQDELSWVQ TAYLIAEIIV IPMSGWLSKV MSTRWLFAAS AVGFTITSML CGLAWDINSM ILFRGLQGAL GAAMIPTVFT TAFVLFPGRQ RLIASTTIGA LASLAPAIGP VIGGWITDQW SWHWLFYLNL VPGIAVAVLV PRYVHIDAPD LSLIKRGDYL GILLMSGFLG CLEYVLEEGP RKNWFGDDAI VICAWISGIC GFLFIVHALT AKDPIVDLRA LAVRNFGIGS LLSFVTGIGI FVTVFLTPLF LAQVRAFSSL QIGIALLSVG AFQLIALCAY AFAARYVSMR ALLVFGLICF GLGCYLYTPI THDWGWQELL LPQALRGIGQ QFSVPPIVTM ALGSLPQSRL KSASGLFNLM RNLGGAIGIA VSATMLNDRL NFHYLRLNEH VSAGEPQVAS LLDRQAAYWG SVAGNTLNTA QAGLANLHRL IYREALTLTY ADAYYALSLC FVVALLAVVF SKPITLNAPP PDAH
|
| |