Gene Bcen2424_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3754 
Symbol 
ID4453039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp612629 
End bp614203 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content66% 
IMG OID639695812 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_837384 
Protein GI116691851 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CGTTTTCCGG CGACCCCGCG TCGCAACCGA CCAAACAGCG CGTGTTCGCG 
TTCGCGCTGA TGTGCGTCGG CTTCTTCATG GCGACGCTCG ACATCCAGAT CGTCGCGTCG
TCGCTGCGCG ACATCGGCGG CGGGCTGTCC GCGAGCCAGG ACGAACTGTC GTGGGTGCAG
ACCGCGTACC TGATCGCCGA GATCATCGTG ATCCCGATGT CGGGCTGGCT GTCGAAGGTG
ATGTCGACCC GCTGGCTGTT CGCCGCGTCG GCCGTCGGCT TCACGATCAC CAGCATGCTG
TGCGGGCTCG CGTGGGACAT CAACTCGATG ATCCTGTTTC GCGGGCTGCA GGGCGCGCTC
GGCGCCGCGA TGATCCCGAC CGTGTTCACC ACCGCGTTCG TGCTGTTCCC CGGCAGGCAG
CGGCTGATCG CGTCGACGAC CATCGGCGCG CTCGCGTCGC TCGCGCCGGC GATCGGCCCC
GTGATCGGTG GCTGGATCAC CGACCAATGG TCATGGCACT GGCTGTTCTA CCTGAACCTC
GTGCCGGGCA TCGCGGTGGC CGTGCTCGTG CCGCGCTACG TGCATATCGA CGCGCCCGAT
CTCAGCCTGA TCAAGCGCGG CGACTATCTC GGCATCCTGC TGATGTCCGG CTTCCTCGGC
TGCCTCGAGT ACGTGCTCGA GGAAGGCCCG CGCAAGAACT GGTTCGGCGA CGATGCGATC
GTGATCTGCG CGTGGATCTC CGGCATCTGC GGCTTCCTGT TCATCGTGCA TGCGCTGACC
GCGAAAGACC CGATCGTCGA CCTGCGCGCG CTGGCCGTGC GCAACTTCGG GATCGGCAGC
CTGCTGTCGT TCGTGACCGG CATCGGCATC TTCGTGACCG TGTTCCTGAC GCCGCTGTTT
CTCGCGCAGG TGCGTGCGTT CAGCTCGCTG CAGATCGGTA TCGCGCTGCT GTCGGTCGGC
GCGTTCCAGT TGATCGCGCT GTGTGCGTAT GCGTTCGCCG CGCGCTACGT CAGCATGCGT
GCGCTGCTCG TGTTCGGGCT GATCTGCTTC GGCCTCGGCT GCTACCTGTA CACGCCGATC
ACACACGACT GGGGCTGGCA GGAACTGCTG CTGCCGCAGG CGCTGCGCGG CATCGGCCAG
CAGTTCAGCG TGCCGCCGAT CGTGACGATG GCGCTCGGCT CGCTGCCGCA ATCGCGCCTG
AAATCGGCGA GCGGGTTGTT CAACCTGATG CGTAACCTCG GCGGCGCGAT CGGTATCGCC
GTGAGCGCGA CGATGCTCAA CGACCGGCTG AATTTTCACT ATCTGCGCCT GAACGAGCAC
GTGAGCGCCG GCGAGCCGCA GGTCGCGTCG CTGCTCGATC GCCAGGCCGC GTACTGGGGA
TCGGTGGCAG GCAATACGCT GAACACCGCG CAGGCCGGGC TCGCGAACTT GCATCGGCTG
ATCTATCGCG AAGCGCTCAC GTTGACCTAT GCGGATGCGT ACTACGCGCT ATCGCTGTGC
TTCGTCGTCG CGCTGCTTGC CGTCGTGTTT TCCAAACCCA TTACGTTGAA CGCGCCGCCG
CCGGACGCGC ACTGA
 
Protein sequence
MTTAFSGDPA SQPTKQRVFA FALMCVGFFM ATLDIQIVAS SLRDIGGGLS ASQDELSWVQ 
TAYLIAEIIV IPMSGWLSKV MSTRWLFAAS AVGFTITSML CGLAWDINSM ILFRGLQGAL
GAAMIPTVFT TAFVLFPGRQ RLIASTTIGA LASLAPAIGP VIGGWITDQW SWHWLFYLNL
VPGIAVAVLV PRYVHIDAPD LSLIKRGDYL GILLMSGFLG CLEYVLEEGP RKNWFGDDAI
VICAWISGIC GFLFIVHALT AKDPIVDLRA LAVRNFGIGS LLSFVTGIGI FVTVFLTPLF
LAQVRAFSSL QIGIALLSVG AFQLIALCAY AFAARYVSMR ALLVFGLICF GLGCYLYTPI
THDWGWQELL LPQALRGIGQ QFSVPPIVTM ALGSLPQSRL KSASGLFNLM RNLGGAIGIA
VSATMLNDRL NFHYLRLNEH VSAGEPQVAS LLDRQAAYWG SVAGNTLNTA QAGLANLHRL
IYREALTLTY ADAYYALSLC FVVALLAVVF SKPITLNAPP PDAH