| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3620 |
|---|
| Symbol | |
|---|
| ID | 4451716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 465516 |
|---|
| End bp | 466433 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695679 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837252 |
|---|
| Protein GI | 116691719 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00938056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGG TCGATCATCT CGATCTGAAC CTGTTGCGCG TATTCCAGGC GATCGTCGAG
GAACGCAGCC TGACGAAGGC CGGCGAGCGG CTCGCGCTGT CGCAGCCGGC CGTGAGCTAT
TCGCTCGGCC GGCTGCGCAC GCTGTTCGAC GATCCGCTGT TCGTGCGGAC GCGCTCGGGC
ATGCAGCCGA CGCCCGTCGC GCTCGAACTC GCGGGCATCG TCGGCAAGGC GCTCGACATG
GTGCGCGTGG CGCTGCGCTA CGCGGAGCGC TTCGATCCGG CCACCAGCGC GCGCACGTTC
CGGGTGTCGC TGTCGGATGC GGGCGAGATG GCGTACCTGC CGGCGATCTG CCAGGCGCTG
CGCGAGCGTG CGCCGCGCGT GACGTTGAGC GTGCAGCCGC TGCCGGTGGA GGAGATCGAG
GAAGCGCTGC GCGCGAGCCG GCTCGATTTC GCGATCGGCA ACCTGCCGGA GCTGATGCCG
CGCACGCGCC ACCAGGTGCT GTTCGAGGAA ACCTACGTGT GCATGACGGG GCGCCGGCGC
GGGCTGCCGA CGGCCGCTGT GCTGAGTCTC GAGCAGTTCG TGCGCGCCGC GCACGTCAAC
GTGAAATCGG TCGAGCACAG CCACCACGCG CTCGACGACG CGTTGCGCGC GCAGGGCGTG
GGCCGCAACA TCGCGCTCGA GGTGCCGCAC TTCGTCGCGC TGCCGAGCGT GCTGTCGGTC
ACCGATCTGT ATGCGACGCT GCCGAGGCGG CTCGCGCAGA TCCTGAACCG CGACAACGCA
TTCCGCCTGT ATGAACTGCC GGTCACGCTG CCGCCCGCGC CGGTGACGAT GCACTGGCAC
GAGCACTTCC ACGAGGACGA GGGCAACGCG TGGATGCGCG CGCTGCTCGC GGAGATCGTC
GAGCGTTTCG ACGAATGA
|
|---|
| Protein sequence | MTSVDHLDLN LLRVFQAIVE ERSLTKAGER LALSQPAVSY SLGRLRTLFD DPLFVRTRSG
MQPTPVALEL AGIVGKALDM VRVALRYAER FDPATSARTF RVSLSDAGEM AYLPAICQAL
RERAPRVTLS VQPLPVEEIE EALRASRLDF AIGNLPELMP RTRHQVLFEE TYVCMTGRRR
GLPTAAVLSL EQFVRAAHVN VKSVEHSHHA LDDALRAQGV GRNIALEVPH FVALPSVLSV
TDLYATLPRR LAQILNRDNA FRLYELPVTL PPAPVTMHWH EHFHEDEGNA WMRALLAEIV
ERFDE
|
|---|
| |