Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3597 |
Symbol | |
ID | 4451608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 442223 |
End bp | 444241 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639695656 |
Product | DedA family membrane protein |
Protein accession | YP_837229 |
Protein GI | 116691696 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.673298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CGATCCATGC GTGGATCGGC GCGATCGGCG CGCATCCGCT GCTCGTGCTG GCGATCGTGT TCGTGGCCGC GTGCGCCGAG GCGATCGCGC TGGTCGGCAC GATCGTGCCG GCCGGCGCCG TGATGTTCGC GGCCGGCGCG CTGATCGGCG CGGGCGCGCT CGACGCATGG GCGACGATCG GCGTCGCGGC CGTCGGCGCG GTGATCGGCG ACGGGATCAG CTACGAACTC GGCCGGCATT ACCGCGGGAT GATCCGCAAC GCGTGGGCGC GCTTCGGCTA TGCGAGCGCC TACGCGCGCG GCGAGGAATT CGTGCTGCGT CACGGCATGA AGAGCATCGT GCTCGCGCGC TTTCTCGCGC CGGTGCGGGC GGTCGTGCCG GTCATCGTCG GCTGCGCGAC GCTGCCGCGC CGGTCGTTCT ATCCAGTCAA CGTGATCTCC GCGCTCGTGT GGGCGCCCGT GCACGTCGCG CCCGGCATCC TGTTCGGCGC GTCGGCTGCG CTGGCCGCGG CGATCAGCGT GCGGGTCGCC GCGATCCTGC TGGTCGTGGC CGGGCTGGTC GCGCTCGTGT GGATCGGTGT GCGCGTCGCG CTGCGGCGCG GCTGGCCGTT GCTGCGCCGC GCGCTCGTCC AAACCGTGCA TGCATGCGCG CGCCGCTGGC CGCGATTCGG CGCGCGGCTG CACGACGGGA TCGCGTACTT GCGCGGGCTG CCCGGCGCGG TGCCCGTGCT CGCGCTGCTG TTCATCGGCT GCGTATGGCT GTTCGCGGGG ATCGTGCAGG ACGTCGTCGC GAACGATCCG CTGATGCATG TGGACATTGC GCTGTATGCG TTCCTGCAGA ACCTGCGCAC GCCACCCGGC GACGCCGTGA TGAGTGCGCT CGCCGTGCTG CATGGGCACG ACACGGGGCT GATCGTCGCG GCCGCGTTCC TCGTGTGGCT GATGATCCAT CGCTGCTGGC TGACGGCGGC CTGGTGGCTC GCGACGATCG GTGTCGCCGT TGCGCTCGTG CCGGTGTTCG GCGCGAGCGT GCCCGGCGCG ACGCCCGCGA GCCTGCCGCC CGGCGCGCTG CACGTGGCGC TGCCCGACGC CGACGCCGCG TTCGCGATCC TCGCGAGCAG CGGCCTCGGC TGGGCGCTCA CGCGCGACCG GCCCGCGCTG TGGCGCATAC CGGTCGTGAC GGCGGTCGTG CTGTGGATCG TGCTCGGCGG CTTCGCGCGA CTGTATGTCG GCGATACCTG GTTGTCGGGT CTGCTGGGCG GATGGAGCCT CGGGCTCGCG TGGTTCGCGC TGCTCGCCGG CGCCTATGCG TACTGGCGTG TGCGCGAGCA CGTACAGCCC AGAGGCGCGC TCGTCGCGGT CGTCGTCGTG CTCGCGACGG CCGGTGTATG GACAGTTCCC GCGCAGTGGC AGCTCGATCG CGCGGCGCGT CCGCATGTCG GCGACGTGGT CGCGATGACC GTCGACCAGT GGCTGCGCGG CGGGTGGCAG CGCGTGCCGA CGCGGCGCAC CGAGATCGGC GGCGACCGCG AGGAATTTCT GCCGCTGCAA TGGAGCGCGA CGTCGGACAC GCTCGACCGT CATCTCGCGC AGGCCGGCTG GCAGCGCGCG ACGCCGTGGA CGCCGGCCAC CGCGCTGCGC TGGCTGTTGC CGCAGGCGGC CGCCGATACG CTGCCCGTGC TGCCGCGCTA CACGCATGGC GAAAGCACGC GGCGTGTGTT CGTTCGCGTC GATCCGGCCC ACCCGGAAAG CCGCTTCGTG CTGCGGTTGT GGCGCTATCC GTACGTGTTG CAGGATGCGC TCGGCATGCG GCCGCTGTGG TACGGCGCGC TGTATCGCGA GACGCTGCGC CGGCCGGCGC GGCTGATGAC GTTCGTGCGC TCGACGACGA TCGACGATGC GGTGGCGATC GCGCACGCGC TGGCGGTCGA GCCGACGATC GTGCATCGGC CGGCGGGGAT GGCGGCCGCG CCGGACGCGA TGCTGCTCGT GTGGATGGTC CAGCCGTGA
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Protein sequence | MSDTIHAWIG AIGAHPLLVL AIVFVAACAE AIALVGTIVP AGAVMFAAGA LIGAGALDAW ATIGVAAVGA VIGDGISYEL GRHYRGMIRN AWARFGYASA YARGEEFVLR HGMKSIVLAR FLAPVRAVVP VIVGCATLPR RSFYPVNVIS ALVWAPVHVA PGILFGASAA LAAAISVRVA AILLVVAGLV ALVWIGVRVA LRRGWPLLRR ALVQTVHACA RRWPRFGARL HDGIAYLRGL PGAVPVLALL FIGCVWLFAG IVQDVVANDP LMHVDIALYA FLQNLRTPPG DAVMSALAVL HGHDTGLIVA AAFLVWLMIH RCWLTAAWWL ATIGVAVALV PVFGASVPGA TPASLPPGAL HVALPDADAA FAILASSGLG WALTRDRPAL WRIPVVTAVV LWIVLGGFAR LYVGDTWLSG LLGGWSLGLA WFALLAGAYA YWRVREHVQP RGALVAVVVV LATAGVWTVP AQWQLDRAAR PHVGDVVAMT VDQWLRGGWQ RVPTRRTEIG GDREEFLPLQ WSATSDTLDR HLAQAGWQRA TPWTPATALR WLLPQAAADT LPVLPRYTHG ESTRRVFVRV DPAHPESRFV LRLWRYPYVL QDALGMRPLW YGALYRETLR RPARLMTFVR STTIDDAVAI AHALAVEPTI VHRPAGMAAA PDAMLLVWMV QP
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