| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3583 |
|---|
| Symbol | |
|---|
| ID | 4451590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 428121 |
|---|
| End bp | 429314 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639695642 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_837215 |
|---|
| Protein GI | 116691682 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.160701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTT CGGGGAACGA CGCACGCGGC GCATGGCGGC GCGTGCTGGG CACGGTGGCG
GCGCTCGCTG CCGCATGGGG TTTGTCGACG GGCGGCGCGC TAGCGGCCGG CGTGTCGGGC
GAGCCGGTGG TGATCGGTGT GAGCGGGCCG CTCACGGGCC AGGACGCGCA GTACGGCGAG
CAGTGGAAGC GCGGCTTCGA TCTCGCGCTC GACGAGATCA ACGGCAGCGG CGGCATTCAC
GGCCGGCCGC TCGCGATCGA CTTCCAGGAC AGCCGCAGCG ATCCGCGCCA GGCGGTGGCG
ATCGCGCAGA AGTTCGTCGC CGATCCGCGC ATCGCGATCG AGCTCGGCGA TTTCTCGAGC
GCGACGTCGA TGGCCGCGTC GCCGATCTAT CAGCGCGGGC AACTGATCCA GTTCGGCTTC
ACGAATTCGC ATCCGGATTT CACGAAGGGC GGCGACTATC TGTGGAGCAC GGCGCTGAGC
CAGGCCGAGG AACAGCCGCT GCTCGCGCGC TACGCGGTGA AGGAACTCGG CTTCAAGCGG
ATCGCGGTGC TGTACCTGAA TACCGACTGG GGGCGCACCA GCAAGGACAT CTTCGCGAAG
GCGGTGACGG GGCTCGGCGC GCAGGTCGTC GCGGCCGAAG GCTACCAGCC GGCGGAGAAG
GATTTCCGTT CGACGCTCGT GCGCATCGGT GAATCGAAGC CCGATTCGAT CGTGCTGATC
TCCTATTACG CCGACGGCGC GCAGATCGTG CGCCAGGCGC GCACGTCGGG CGTTGCACTG
CCGATCGCGG CGGTGGGCTC CGTGTATTCG CCGAAGTTCC TCGAACTGGG CGGCACGGCC
GTCGAAGGCG TCTATACGGA GTCGAACTTC TTCCCGGCCG AACCGCGCCC CGAGGTGCAG
GCGTTCGTGC AGCGCTATCG CGCGAAATTC CACGCCGATC CCGATTCGTT CGTCGCGCGT
GCTTACGATG CGCTGATCCT GTCGGCCGAG GTGCTGCGCC GCTACGGCAC GACGCGCCAG
GCCGCGCACG ACGGCTTCGC GAAAGTGAGC GACGTGCCGA GCGTGATCTT CGGCAAGGTG
CGTTTCGATC CGCAGACGCG CCGCGTCGCC GGCGCGCGCA CGGTCTATCT GGTCGTGAAG
CAGGGGCAGT GGGCGCTGTG GGACGGCGCG AAGCCGCAGC TCGCGGCGCG CTGA
|
|---|
| Protein sequence | MNVSGNDARG AWRRVLGTVA ALAAAWGLST GGALAAGVSG EPVVIGVSGP LTGQDAQYGE
QWKRGFDLAL DEINGSGGIH GRPLAIDFQD SRSDPRQAVA IAQKFVADPR IAIELGDFSS
ATSMAASPIY QRGQLIQFGF TNSHPDFTKG GDYLWSTALS QAEEQPLLAR YAVKELGFKR
IAVLYLNTDW GRTSKDIFAK AVTGLGAQVV AAEGYQPAEK DFRSTLVRIG ESKPDSIVLI
SYYADGAQIV RQARTSGVAL PIAAVGSVYS PKFLELGGTA VEGVYTESNF FPAEPRPEVQ
AFVQRYRAKF HADPDSFVAR AYDALILSAE VLRRYGTTRQ AAHDGFAKVS DVPSVIFGKV
RFDPQTRRVA GARTVYLVVK QGQWALWDGA KPQLAAR
|
|---|
| |