Gene Bcen2424_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3536 
Symbol 
ID4452208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp373859 
End bp374923 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content71% 
IMG OID639695595 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_837168 
Protein GI116691635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0480036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGGCTTCACA CAACGTTCAG TCGATCTGGT ACACGCGCTG TCCGGTGCCG 
ACACCGCTCG GCATCGCCGC GCATCTCGGC TGGCTGGATC ACGAATTCGC CGGCGACGGC
ATCACCGTGC GCGCGCTGCA GGAAAGCCAG CACGCGGCGC TGCATCACGC GCACGTCGAC
CATTCGCTCG ACAACGCGTT CCGGCAGGGC GGCAGCATTC CGGCGCTGTG GGCGCGTGCG
TCCGGCGCCG ACACGCGCGT GGTCGCGCTG ACCTGGGTCG ACGAGGCCCA GGCGATCGTC
GCGCTGCCGG AAGCCGGCCT CGCGCGGCCG AAGGACCTGC GTGGGCGCCG CATCGGCCTG
CCGCGCCGCG ACGGCGAGCG GATCGACATC TTCCGCGCGG CGGCGCTGCG CGGCTTCGTG
AGTGCGCTGT CGCTCGACGG GCTCGGCCCC GGCGACGTCG AATGGGTCGA CGTACCGGCA
TCGAACCTGC GCGCGCCGGT GGCGACGCCC GCGACCCGCG ACGCGGCGTT CAGCCATCCG
GCGAGCCTGT CGAGCCGGCG GCTCTATGCG GCCGAGGCGG CCGCGCTGGT GCGCGGCGAC
GTCGACGCGA TCTACGTGAA GGGTTCGCTC GGGCTCGAAA CCGCGCACCT GATCGGCGCG
CAACCGGTGG TCGACATCGG CTTTCATCCC GATCCGCAGA TCCGCATCAA CAACGGCTCG
CCGCGCCCGC TGACCGTCAA TGCGTCGACG CTCGAACGCC ATCCCGACAT CGTCAGCCGC
TTTCTCGCAC GCGTGACCGA CGTCGAAGGG TGGGCGCGCG AGCACGAGCA CGAAGTGCTC
GGCTATCTCG GCCGCGAGAC GGGGTCGGGC CACGACTCGC TGCGGCTCGC GTACGGCGTG
GACGTGCACC GGCGGCTGCG CACGGATCTC GACGAAGCGT CGATCGCCGC GCTCGATGAT
TTCAAGCGCT TTCTGGTCGA CTGGCGGTTC CTGCCCGCCG ACTTCGACGT GCGCGCGTGG
ATCGACCGGC GCGCGCTCGA CGGCATCGCG ACGCTGTCGC GGTGA
 
Protein sequence
MSTTASHNVQ SIWYTRCPVP TPLGIAAHLG WLDHEFAGDG ITVRALQESQ HAALHHAHVD 
HSLDNAFRQG GSIPALWARA SGADTRVVAL TWVDEAQAIV ALPEAGLARP KDLRGRRIGL
PRRDGERIDI FRAAALRGFV SALSLDGLGP GDVEWVDVPA SNLRAPVATP ATRDAAFSHP
ASLSSRRLYA AEAAALVRGD VDAIYVKGSL GLETAHLIGA QPVVDIGFHP DPQIRINNGS
PRPLTVNAST LERHPDIVSR FLARVTDVEG WAREHEHEVL GYLGRETGSG HDSLRLAYGV
DVHRRLRTDL DEASIAALDD FKRFLVDWRF LPADFDVRAW IDRRALDGIA TLSR