| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3534 |
|---|
| Symbol | |
|---|
| ID | 4452206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 372696 |
|---|
| End bp | 373412 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695593 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_837166 |
|---|
| Protein GI | 116691633 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0125924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTA TCCCGACCAC CTTCATCGTC CAGGGCGCGC TCTGGCTGCT CGTCGTTTTC
TCCGTCGTCA CGTGGACGCT GATCGTCGTG AAGGCCATCC AGAGCCTGCG CTCGAGCGCG
CGCAACCGGC GTTACGTCAG CGCGTTCTGG GCCGCGAACA GCTTCCACGA CGCGGCCACG
CTCGACGGCG CGAACAGCCC GGTGGGCGAA CTCGCCGCGA CGGGCTTCGA CGCACTGCGA
CGCGCCGACG AGAGCAGCGC GCACGATCTC GAACACAGCT GGAGCCGTCA TGACCTGCTC
GAACGCCATC TGCGCCAGCA GATCCACAAC GCGCGCCGGC GCGAGGAAGC GGGGCTCGCG
GTGCTCGCGT CGATCGGCAG CACCGCGCCG TTCGTCGGGC TGTTCGGCAC CGTGTTCGGC
ATCATCCATG CGCTGACCGC GATCACGCAC AGCGCGTCGG CGAGCATCGA CGTCGTGGCC
GGGCCGATCG GCGAGGCGCT GGTCGCGACC GGCATCGGCA TCGCGGTCGC GGTGCCGGCC
GTGCTCGCGT ACAACTTCTT CGTGCGCCGC GTGAAGGCCG CGTCGGCCGA TCTCGACGCG
TTCGCGACCG ACTTCGTCAC GCTCGCGCAG AAAGCCGGCT TCCGCGTGCC GGCCGCCGTG
CCCGCCGCCA CGCCGGCGCG CCGTTCCGAC GACACCCGCC AGGAGGCGTT CGCATAA
|
|---|
| Protein sequence | MNAIPTTFIV QGALWLLVVF SVVTWTLIVV KAIQSLRSSA RNRRYVSAFW AANSFHDAAT
LDGANSPVGE LAATGFDALR RADESSAHDL EHSWSRHDLL ERHLRQQIHN ARRREEAGLA
VLASIGSTAP FVGLFGTVFG IIHALTAITH SASASIDVVA GPIGEALVAT GIGIAVAVPA
VLAYNFFVRR VKAASADLDA FATDFVTLAQ KAGFRVPAAV PAATPARRSD DTRQEAFA
|
|---|
| |