| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3530 |
|---|
| Symbol | |
|---|
| ID | 4452202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 368033 |
|---|
| End bp | 369109 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695589 |
|---|
| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_837162 |
|---|
| Protein GI | 116691629 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.033604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.927318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA GGCCCGATTC GTCATCGGAC AAGCAGCAGA CGTTCTGGTA CGCCCGATCG
CCGGTGCCGA CGCCGCTCGG CATCGCCGTG CACCTCGGCT GGCTCAACGG CGAGACGTCG
GCCGACGGCG TCGCGATCCG CTCGCCACGC GGCGCCACGC GGCACGACGT GTCGTCGATC
AGCGACCACA CGCTCGCGCA GTCGTTTCGC CAGGGCGGCA GCATCCCCGC GATGTGGGCG
CGCTCGAACG ACGCGAACAC ACGCGTGATC GGGTTGTCGT GGGTCGACGA ATCGCAGCTG
ATCCTCGCGC GCCCCGAGTC GGGCATCCGC TCCGTGAAGG CGTTGCGCGG GCGCCGGATC
GCGATTCCGA GCCGCCCCGA CGATCGCATC GACATCTTTC GCGCGTCGGC GCTGCGCGGC
TTCGTCAATG CGCTGAGCCT CGACGGGCTG ACGCTCGGCG ACGTCGAACG CGTCGACGTG
CGCGCCCGCA CGCTGCAAGC CGTCGGCCCG GCGCGCGCGG CGAGCCTGTT CGCGTCACCG
CAAGGCTTTT CGAGCCGTGC GCTGTATGCG GCCGAAGCCG GCGCGCTGCT GCGCGGCGAA
GTCGATGCGA TCTACGTGAA GGGCTCGACG GGCCTCGAGA TCGCGCAACT GATCGGCGCG
CACGTCGTGA TCGACATCGG CTTTCATCCG GAGCGCTCGA TCCGCAACAA CAACGGCACG
CCGCGCCCGC TGACCGTCAA CGCGGACGTG CTCGCGAACC ACCCCGACAT CGTCGCCGGC
TTCCTGAAAC TCGTGGTCGC CGCCGGCGAA TGGGCCGGCA CGCATCCCGA CGAAACCGCG
CACTACGTGG CCGGCGAAAC CGCGTCGTCG ATCGACTGGG TACGCGCCGC GTACGGCAAC
CAGTTGCACC GGCATCTCGG CATCAATCTC GACGACGAAT CGGTCGCCGC GCTCGACGAG
TTCAAGACGT TCCTGCACGA CCACGGTTTT CTGGAAGCCG ATTTCGACGT CGCCGACTGG
ATCGATCCGC GCCCGCTCGC CGACGTGCTG CGGCCGTCGT TGCAGAAGCG CGCGTGA
|
|---|
| Protein sequence | MTDRPDSSSD KQQTFWYARS PVPTPLGIAV HLGWLNGETS ADGVAIRSPR GATRHDVSSI
SDHTLAQSFR QGGSIPAMWA RSNDANTRVI GLSWVDESQL ILARPESGIR SVKALRGRRI
AIPSRPDDRI DIFRASALRG FVNALSLDGL TLGDVERVDV RARTLQAVGP ARAASLFASP
QGFSSRALYA AEAGALLRGE VDAIYVKGST GLEIAQLIGA HVVIDIGFHP ERSIRNNNGT
PRPLTVNADV LANHPDIVAG FLKLVVAAGE WAGTHPDETA HYVAGETASS IDWVRAAYGN
QLHRHLGINL DDESVAALDE FKTFLHDHGF LEADFDVADW IDPRPLADVL RPSLQKRA
|
|---|
| |