Gene Bcen2424_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3492 
Symbol 
ID4451693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp325270 
End bp326430 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID639695551 
Productextracellular ligand-binding receptor 
Protein accessionYP_837124 
Protein GI116691591 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.839805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGAG CAAATTTATC CAGCGCATTC AAGCTTTCGC TGAACGCCAC GCTTTCGGTG 
TTGGCGCTTG CCGCCGCGAC GGCAGCGAGT GCAGACCCGA TAGTCGTGAA GATCGGCAGC
GTCGAGCCGT TGACCGGCGG GATCGCGCAT CTTGGTAAAG ACAACGAAAA CGGCGCGCGC
CTCGCGGTGG AGGAAATCAA CGCGAAAGGC CTGACGATCG GCGGGCATTC CGTCACGTTG
CAGCTCGACG CACAGGATGA CGCAGCCGAT CCGCGCACGG CCACGCAAGT GGCCCAGAAG
CTCGTCGACG ACAAGGTGGT GGCCGTGGTC GGTCACCTGA ACTCGGGTAC GTCGATCCCG
GCCTCGAAGA TCTACAGCGA AGCCGGCATC ACGCAGATCT CCCCGTCCTC GACCAATCCG
GTCTACACGC AGCAGGGCTT CAAGACCACC TTCCGGGTCG TGGCCACCGA CGCGCAGCAA
GGCCCGGCGC TGGCGAACTA TGCGAAGAAG CTGGGCAACA TCCATCGTGT GGCGATCGTC
GACGATTCGA CCGCCTACGG CCAGGGCCTG GCAAACGAAT TCGAGAAGCG CGCGAAGGAG
CTGGGCATCA CCGTGCTGTC GCACGATGCC ACCAGCGACA AGGCCATCGA CTTCCGCTCG
GTACTCACCA AGATCAAGGG CGAGACGCCT GACGCGATCA TGTACGGCGG CTCGGATTCG
ACCGGCGGCC CGTTCGCCAA GCAAGCCAAG CAGCTCGGCC TGCGCGCACG CGTCTTCACG
GGCGATGGCG TCTGCACGGA ATCGTTGGCC AATCTCGCCG GCGATGCGAC CGAGAACGTG
GTGTGCTCGC AGGCCGGCGC GGCGATCCAG ACGATGCCGG GCGGCGAGGC GTTCCAGGCG
AAATACAAGA AGCGCTTCGG ACAGGTAGTC GAATACGACG CGCCGTTCGC CTATGACGCC
GTGTACATCA TCGTCGATGC GATGAAGCGG GCGAAATCCA CCGACCCCGC CAAGATCCTC
GCGCAGATGC CGCCGACCGA CTATCACGGC GTGGTCGGTG AAACCCAGTT CGATTCGCAT
GGCGATCTCG CGCATGGCGT GATCTCGCTG TACGTCTACA AGGCGGGCAA GAAGACGTTC
CTCGACCAGG TGAAGATGTA A
 
Protein sequence
MKRANLSSAF KLSLNATLSV LALAAATAAS ADPIVVKIGS VEPLTGGIAH LGKDNENGAR 
LAVEEINAKG LTIGGHSVTL QLDAQDDAAD PRTATQVAQK LVDDKVVAVV GHLNSGTSIP
ASKIYSEAGI TQISPSSTNP VYTQQGFKTT FRVVATDAQQ GPALANYAKK LGNIHRVAIV
DDSTAYGQGL ANEFEKRAKE LGITVLSHDA TSDKAIDFRS VLTKIKGETP DAIMYGGSDS
TGGPFAKQAK QLGLRARVFT GDGVCTESLA NLAGDATENV VCSQAGAAIQ TMPGGEAFQA
KYKKRFGQVV EYDAPFAYDA VYIIVDAMKR AKSTDPAKIL AQMPPTDYHG VVGETQFDSH
GDLAHGVISL YVYKAGKKTF LDQVKM