| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3379 |
|---|
| Symbol | |
|---|
| ID | 4452453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 211303 |
|---|
| End bp | 212265 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695438 |
|---|
| Product | Beta-lactamase |
|---|
| Protein accession | YP_837011 |
|---|
| Protein GI | 116691478 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2602] Beta-lactamase class D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTC GACAGCCGGC GATCCGTCGA TACACTGTGA GCCATCCCGA CGGCCGCGAT
CGCCCTCACC GATGCCGGCC GCCGCTTCGC TTGCGCACGG CTTCCCGCTT TCCGTCCGCC
CCGCGCATCT TCCGCACGCT TTCCAAGGAA TTGCACTTGA AGCACTGGCA TTACGCGCTG
TTCGCCTTCG CCGGCCTCCT GGCCGCCGCG TCCTCTCACG CGCACCCCGT CTGCACCGTC
GTCGCCGACG CCGCCACCGG CAAGCTGCTC GTGCAGCAGG GCGACTGCTC GACCCGCGTA
ACGCCGGCAT CGACGTTCAA GGTCGCCATC GGCCTGATGG GCTTCGACGC CGGCGTGCTG
AAGGACGAAC ACACGCCCAC GCTCGAGTTC CACGCCGGCT ACCCCGACTG GGGCGGCGCG
CCGTGGCGCG AACCGACCGA TCCGGCGCGC TGGATGAGGC TGTCGGTCTT CTGGTATTCG
GAGCAGGTCA CGCAGGCGCT CGGGCAGGCA CGCTTCCAGC AGTACACGAG CGCGTTCGAC
TACGGCAACG CGGACGTCAC CAGCAAAGCG GGCGAACTCC CCGGCATGAT GGGCGCGTGG
GTCAATTCGT CGCTACGGAT CTCGCCGCTC GAACAGGTCG CGTTCATGCG CAAGATCGTG
CAGCGGACGC TGCCCGTCAG CGCGCACGCG TATGACATGA CTGCGCGCAT CACGCTGCTC
GACGCGCAAC GGGGCGGCTG GACGGTGCAC GGCAAGACCG GCACCGGCTC GCCGGGCATC
CAGTACGACG CGGCACACGC GTACGGCTGG TTCGTCGGCT GGGCGACGAA GGGATCGCGC
ACGCTGGTGT TCGCGAACCT GATCCAGGAC GACGAGCGGC AAACGCCCAA TGCCGGCCTG
CGCTCGCGCG ACACGTTCCT CGCGGCGCTG CCGACGCTCG CCGCCGCGGC CCCGCCGCAA
TGA
|
|---|
| Protein sequence | MTGRQPAIRR YTVSHPDGRD RPHRCRPPLR LRTASRFPSA PRIFRTLSKE LHLKHWHYAL
FAFAGLLAAA SSHAHPVCTV VADAATGKLL VQQGDCSTRV TPASTFKVAI GLMGFDAGVL
KDEHTPTLEF HAGYPDWGGA PWREPTDPAR WMRLSVFWYS EQVTQALGQA RFQQYTSAFD
YGNADVTSKA GELPGMMGAW VNSSLRISPL EQVAFMRKIV QRTLPVSAHA YDMTARITLL
DAQRGGWTVH GKTGTGSPGI QYDAAHAYGW FVGWATKGSR TLVFANLIQD DERQTPNAGL
RSRDTFLAAL PTLAAAAPPQ
|
|---|
| |