Gene Bcen2424_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3360 
Symbol 
ID4452470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp193390 
End bp194022 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID639695421 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_836994 
Protein GI116691461 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.742854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC TCTCCACGCT CGCGCTGTTC TCCGGCGCGT GTCTCGCGCT GACCATCACG 
CCCGGCCCCG ACATGTTGCT GATCGCGTCC CGCAGCGTGA GCCAGGGCCG GCGCGCCGGC
TTCGCGACGC TCGCGGGCAT TCAGGCCGGC ACCTACTGCC ACGCGCTGGC GGCCGCGTTC
GGTCTGTCGC AGCTCTTCGT CGCGGTGCCG CTCGCGTATG ACGTCGTGCG CTTCGCCGGC
GCCGCGTATC TGCTGTATCT CGCCTGGAAA ACGTTCCGTT CGGACGCGAC CGCGCTGTCG
CCGGTCGCGT CGCAACGTCG CCGCTCGACC GCGACGATCT TCCGCCAGGG GCTGACGACC
AACCTGCTGA ACCCGAAGAT GGCGCTGTTC GTGCTCGCGC TGTTCCCGCA GTTCGTGCGG
CCCGAGCAGG GTTCGATCGC CGTGCAGATT CTCGTGCTGG CGACGGTGCT CAACCTGATC
GGGCTCGTCG TAAACGGCGC GGTGATTCTG TCCGCGAGCC GGCTGAGCCA GCGGATCGGC
GCGCGCCGCC GGCCGTCGAA GGTGCCGCAG TATCTGCTGG GGTCGGTGTT CGTGGGGCTG
GCGGCGCGGC TCGCGATGGC GGGACGGCAC TGA
 
Protein sequence
MIDLSTLALF SGACLALTIT PGPDMLLIAS RSVSQGRRAG FATLAGIQAG TYCHALAAAF 
GLSQLFVAVP LAYDVVRFAG AAYLLYLAWK TFRSDATALS PVASQRRRST ATIFRQGLTT
NLLNPKMALF VLALFPQFVR PEQGSIAVQI LVLATVLNLI GLVVNGAVIL SASRLSQRIG
ARRRPSKVPQ YLLGSVFVGL AARLAMAGRH