| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3344 |
|---|
| Symbol | |
|---|
| ID | 4451259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 177992 |
|---|
| End bp | 178981 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639695405 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_836978 |
|---|
| Protein GI | 116691445 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0604334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTT TTACTTGTCA CTCGGCGTTC CGCCCGGCCC CCGTGCCTTC TTTCTCACTG
GATCGATCGC CCATGAAGCT CAAGCAACTC GATGCGTTTC TCGCGGTCGC CGAGCATCGC
ACCATTCGCG GTGCGGCGCG TGCGCTCGGC GTCACGCAGC CGGCCGTCAG CGGCATCGTG
CGCGAGCTCG AACACGAGCT GGGCGTGCCG CTCGTCGTGC GCAGCGTCAA GGGGATCGCG
CTGACCGATT ACGGCAGCGC ATTCGCGATT CGCGCGCGGC TGATCGTCGA GGAGATCCAG
CGCACGCGCG ACGAGATCGA GCAGTTGCGG CTGGGCACGA CCGGCTCGGT ATCGATCGCG
GTCAGCCCGA CCGTCGCGTT GACGATCCTG CCGCGCGCGT TCGCGGCCTT CACGCGCGAC
CTGCCCGGCG CGACGCTGAA CGTCGACGAT GCACTGACCG CGACGGACCT CGCGCGGCTG
CGCGACGGCT CGCTCGACTT CATCGTCACG CACCAACTGT CGAACGCGCT GCCGGACCCG
GACGAATTCG CGAGCATTCC ATTGTTCCGC ACGGCGTTCG CGGTCGTCGC GCGAAGCCGG
CATCGGCTCG CGCGGGCCCG CTCGTTGCGC GAGCTCGTCG ATGCGCACTG GTGCGTGCCG
CGCTACGGCG AAGGCGGCGA CGACCTGATC CGCTCGATCT TCATGCCATT CGGCCTCGAC
GTGCCGAAAC GCGTGGTGCA CTGCCCGTCG TTTGCCGCGA CGCTCGGGCT CGTGTCGCAG
ACGGATGCGC TCGGCGTGTT CGCGCGGCCG CTCGCCGAGG TCGAACGCCA GTCGCGCGGG
ATCGTCGCGT TGAATCTCGC CGAGCCGATG CCGGCGCTGA CAGTCGCGAT CGTGATGCGG
CGGCATGCGT TGCTGACGCC GGCCGCGCTC CACTTCATCG AGTGCCTGAA AGGTGCGTCT
GCAACCGTGT CGGCCGCGGA CGACGCGTGA
|
|---|
| Protein sequence | MIIFTCHSAF RPAPVPSFSL DRSPMKLKQL DAFLAVAEHR TIRGAARALG VTQPAVSGIV
RELEHELGVP LVVRSVKGIA LTDYGSAFAI RARLIVEEIQ RTRDEIEQLR LGTTGSVSIA
VSPTVALTIL PRAFAAFTRD LPGATLNVDD ALTATDLARL RDGSLDFIVT HQLSNALPDP
DEFASIPLFR TAFAVVARSR HRLARARSLR ELVDAHWCVP RYGEGGDDLI RSIFMPFGLD
VPKRVVHCPS FAATLGLVSQ TDALGVFARP LAEVERQSRG IVALNLAEPM PALTVAIVMR
RHALLTPAAL HFIECLKGAS ATVSAADDA
|
|---|
| |