Gene Bcen2424_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3201 
Symbol 
ID4453574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp40990 
End bp41700 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID639695267 
Productporin, opacity type 
Protein accessionYP_836840 
Protein GI116691307 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGT CTTTCGCCCT CCCGTTGTCG CTCGCACTGC TGTTCTCGGG CGCGGCATTC 
GCCGATACGG TCGCACCGGA AACGAAAAAG CAGGACCCGA GCGACGCGGG TTACTACGCG
ACCGCGCGCG TCATCGGCGC GTTTGACAAC GCCGTGAACA TGGAGCTGAC GAGCCCGCGT
GTGACGAGCC GCATCGGCGG CCCGGACGGG CAGGATCGCG TGACGGGCTC GGTCGCGGGC
GGCTACCAGT TCGGTAACGG CTGGCGCGCG GAAGGCGAAT ACGTGTTCAA GCGCTCCGGC
AACTTCGTCA GCTACTGGGC GCCGTTCGAC GCGAACGCGA ACGAATTCCA TGTGTCGTCG
CAGCGGCTGA TGCTCAACGG CTATCGCGAC TTCGACCTGG GGCGTGGTTT CTCGGTGTAC
GGCACGCTCG GCGTCGGTGT CGCGATCGTG TCGGCCGAAG GCTGGCAGGG CAACGACACG
CGTCGCTTCG CGTCGAAGAC GCAGACCAAC CTCGCGTATT CGGCCGGCGC GGGCGTGAGC
TATGCGATCA ACAAGCGTTT CACGATCGAC GTCGGATATC GCTATGTCGA CATGGGCAAC
GTCGAGACGG GCTTCAACAC GTTCGTGAAC CGCGTGTCGG CGCGCGACGA GCAACTGAAG
TCGAAGCTGT CGTCGAACGA AGTGTTCATC GGGCTGCGCG GGCGGTTCTG A
 
Protein sequence
MIKSFALPLS LALLFSGAAF ADTVAPETKK QDPSDAGYYA TARVIGAFDN AVNMELTSPR 
VTSRIGGPDG QDRVTGSVAG GYQFGNGWRA EGEYVFKRSG NFVSYWAPFD ANANEFHVSS
QRLMLNGYRD FDLGRGFSVY GTLGVGVAIV SAEGWQGNDT RRFASKTQTN LAYSAGAGVS
YAINKRFTID VGYRYVDMGN VETGFNTFVN RVSARDEQLK SKLSSNEVFI GLRGRF