Gene Bcen2424_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3176 
Symbol 
ID4453426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp12063 
End bp12797 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID639695242 
Productfucose-binding lectin II 
Protein accessionYP_836815 
Protein GI116691282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00638725 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCACAAC CCTTTACCCA CGACGACCTG TACGCGCTGC TGCAACTCGC GGGCAACGAC 
GCCACTGCCG TGCAGGCCAA CGGCGATCAG GCCGTGCTCG ACCGGATGCG TCAGTTCATG
ACCGCGCAGC TCGTCGAGAA ACTGCCGCAA TACGACGTGT TCGTCGATAT CGCGACGATC
CCGTACAGCT TCGACGTCGG CAGTTGGCAG AACAAGGTGA AAACCGATGC GGCAGGCGAG
GTCGTTGCCT GCACGGTGAC GTGGGCCGGC GCGCCGGGCG TGTTGCCCGG TGCCGCGGCG
AAGTTCGGCG TCGGCGCGGT GGTCAATTAC TTCTCGAAAG CGACACCGCA ACCCGTGCAG
CCCGCGCCCG TACCGACCGG CGGCGGTGAA CGCGACGGCG TCTTCAACCT GCCGCCGAAC
ATCGCATTCG GCGTGACCGC GCTGGTCAAT TCGTCCGCCC CGCAGACGAT CGAGGTCTTC
GTCGACGACA ATCCGAAACC CGCCGCGACG TTCCAGGGCG CCGGCACTCA GGACGCGAAC
CTGAACACGC AGATCGTGAA CTCCGGCAAG GGGAAGGTGC GGGTAGTCGT GACGGCGAAC
GGCAAGCCGT CGAAGATCGG CTCGCGTCAG GTCGACATCT TCAAGAAGAC CTACTTCGGG
CTGGTCGGAT CGGAAGATGG CGGCGACGGC GACTACAACG ACGGGATTGC GATCCTGAAC
TGGCCGCTGG GTTGA
 
Protein sequence
MSQPFTHDDL YALLQLAGND ATAVQANGDQ AVLDRMRQFM TAQLVEKLPQ YDVFVDIATI 
PYSFDVGSWQ NKVKTDAAGE VVACTVTWAG APGVLPGAAA KFGVGAVVNY FSKATPQPVQ
PAPVPTGGGE RDGVFNLPPN IAFGVTALVN SSAPQTIEVF VDDNPKPAAT FQGAGTQDAN
LNTQIVNSGK GKVRVVVTAN GKPSKIGSRQ VDIFKKTYFG LVGSEDGGDG DYNDGIAILN
WPLG