Gene Bcen2424_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3140 
Symbol 
ID4448743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3456504 
End bp3457286 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID639695208 
Productextracellular solute-binding protein 
Protein accessionYP_836781 
Protein GI116691158 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC TCCGCTCCAT TCTGGTCGTC GCGCTGCTGC AGGCTGCCGC GGCCACCAGT 
GCGCTGGCTG CCGACGACCT GTCGCAGATC AAGTCGGCCG GCGTGTTCCG CGTCGGCACC
GAAGGCACCT ATGCGCCGTT CACGTACCAC GACGAGACCG GCAAGCTGAC GGGCTTCGAC
GTCGACATCG CGACCGCGAT CGCGCAGCGC CTCGGGGTGA AGCCGCAGTT CGTCGAAGGC
AAATGGGACG GGCTGATCGC GGGGCTCGAC GTGAACCGCT ACGACGCGGT CGTCAACGAA
GTGTCGATCA CCGACGCGCG CAAGGCGAAA TACGATTTCT CGACGCCGTA CATCACGTCG
CACGCGGTGC TGATCGTGCG CGCGGACAAC ACGACGATCC GCTCGTTCGA CGACCTGAAG
GGCAAGAAAT CCGCGAACAC GCTGACCAGC AATTTCGGCA AGCTCGCGGC CGCGCACGGC
GCCGACGTGG TGCCCGTGCA GGGCTTCAAC GAATCGATCG ACCTGCTGAC GTCCGGCCGC
GTCGATGCGA CGATCAACGA CTCGCTGTCG TACCTCGATT TCCGCAAGCA CAAGCCCGAC
GCGAAACTGA AGATCGCGGC GACCGACACG ACCGGCGCGG GCGACGCATC CGGCGTGCTG
CTGCGCAAGG GCAGCCCCGC GCTGGTGGCG GCGATCGACA AGGCGCTCGC GGACATCAAG
GCGGACGGTA CCTACGCGAA GATCTCGCAG AAGTACTTCG GCCGCGACGT GTCGCAGCCG
TGA
 
Protein sequence
MKFLRSILVV ALLQAAAATS ALAADDLSQI KSAGVFRVGT EGTYAPFTYH DETGKLTGFD 
VDIATAIAQR LGVKPQFVEG KWDGLIAGLD VNRYDAVVNE VSITDARKAK YDFSTPYITS
HAVLIVRADN TTIRSFDDLK GKKSANTLTS NFGKLAAAHG ADVVPVQGFN ESIDLLTSGR
VDATINDSLS YLDFRKHKPD AKLKIAATDT TGAGDASGVL LRKGSPALVA AIDKALADIK
ADGTYAKISQ KYFGRDVSQP