Gene Bcen2424_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3126 
Symbolfmt 
ID4448711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3441786 
End bp3442778 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID639695193 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_836767 
Protein GI116691144 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.879337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATA CGTTGCGCGT GATTTTTGCC GGCACGCCGG AATTCGCCGC GGCCGCCCTG 
GCCGCGATCC ACAAGGCCGG TTTCCCGGTG CCGCTCGTGC TGACCCAGCC CGATCGCCCG
GCCGGGCGCG GGATGAAGCT CCAGGCGAGC GCCGTGAAGC GCTACGCCGT CGAGCACGGG
ATGGCCGTCG CGCAGCCGCC GTCGCTGCGC CGCGCGGGCA AGTACCCGGC GGAGGCGGCC
GACGCGATCG AGTTGCTGCG CACGACGCCG CACGACGTGA TGGTGGTGGC CGCGTACGGC
CTGCTGCTGC CGCAGGAAGT GCTCGACATC CCGCGCGCCG GCTGCATCAA CATTCACGCA
TCGCTGCTGC CGCGCTGGCG CGGCGCGGCG CCGATCCATC GTGCGATCGA GGCCGGCGAC
GCCGAGACGG GCGTCACGCT GATGCAGATG GACGTCGGCC TCGACACCGG CGCGATGATC
GAGGAGGCGC GCATCGCGAT CGCGCCTGAC GATACGACCG CGACGCTGCA CGACCGCCTC
GCCGCCGACG GCGCGCGGCT GATCGTCGAC GCGCTCGTGC GGCTCGAGCG CGACGGGACG
CTGCCGGCGA CGCCGCAGCC GGCCGACGGC GTGACCTACG CGGAAAAGAT CGGCAAGCAT
GAAGCGGCGC TCGACTGGCG CAAGCCTGCG GACGTACTCG CGCGCCAGGT GCGTGCGTTC
GACCCGTTCC CGGGCGGCGT CGCGACGCTT GACGGCGCGG CCATCAAGCT GTGGGCGGCC
GAGCCCGTGG CGACGGATGG CACGATTGCC AGCGCGGCGC CCGGCACGAT CGTCGAAGCC
GCGCCGGAAG GCGTGGTGGT CGCATGCGGC AGCGGCGCGC TGCGCGTCAC CCAGCTGCAG
AAGCCCGGCG GAAAACGGCT GCCTGCACGC GAATTCCTCG CCGGTTCGCC GCTCGCCGCC
GGCCAGCGTT TCGCGCTACC CGACGTCGAC TGA
 
Protein sequence
MTHTLRVIFA GTPEFAAAAL AAIHKAGFPV PLVLTQPDRP AGRGMKLQAS AVKRYAVEHG 
MAVAQPPSLR RAGKYPAEAA DAIELLRTTP HDVMVVAAYG LLLPQEVLDI PRAGCINIHA
SLLPRWRGAA PIHRAIEAGD AETGVTLMQM DVGLDTGAMI EEARIAIAPD DTTATLHDRL
AADGARLIVD ALVRLERDGT LPATPQPADG VTYAEKIGKH EAALDWRKPA DVLARQVRAF
DPFPGGVATL DGAAIKLWAA EPVATDGTIA SAAPGTIVEA APEGVVVACG SGALRVTQLQ
KPGGKRLPAR EFLAGSPLAA GQRFALPDVD