Gene Bcen2424_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3098 
SymbolslmA 
ID4448531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp3410999 
End bp3411661 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID639695164 
Productnucleoid occlusion protein 
Protein accessionYP_836739 
Protein GI116691116 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.170288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCGA CTTACCCGCA GGACCAAGCC GTAACGGAAA GCCAGGCCAC ACCCTCCCGC 
CCGCGCCCGA AGCCGGGCGA GCGCCGCGTC ATGATCCTGC AGACGCTCGC GGCGATGCTC 
GAGGCCCCGA AACCCGAGAA AATCACGACC GCCGCGCTCG CGGCCCGGCT CGACGTGTCG 
GAAGCCGCGC TGTACCGGCA CTTCGCCAGC AAGGCGAAGA TGTACGAAGG GTTGATCGAG 
TTCATCGAGC AGGCGCTGTT CGGGCTCGTC AACCAGATCG TCGCGAAGGA GCCGAACGGC 
GTGCTGCAGG CCCGCACGAT CGCGCTGACG ATGCTCAATT TCGCCGCAAA GAACCCGGGC 
ATGACGCGCG TGCTGACCGG CGAGGCGCTG GTCGGCGAGG ACGAGCGGCT CACCGAGCGC 
GTGAACCAGC TGCTCGACCG CATCGAGGCG ACCGTCAAGC AATGCCTGCG CGTCGCGCGC 
ACCGAGGCGC AGGCGCCCGA TGGCGCGACG CCGTTCGTGC TGCCGGCCGA CTACGATCCC 
GGCGCCCGCG CGAGCCTGCT CGTCAGCTAC GTGATCGGCC GGTGGCATCG GTTCGCCAAA 
GGCGGGTTCC AGAAGCCGCC GGGCGAGCAG GCCGATGCGC ATCTGCGGTT GATCCTGCAG 
TGA
 
Protein sequence
MQPTYPQDQA VTESQATPSR PRPKPGERRV MILQTLAAML EAPKPEKITT AALAARLDVS 
EAALYRHFAS KAKMYEGLIE FIEQALFGLV NQIVAKEPNG VLQARTIALT MLNFAAKNPG 
MTRVLTGEAL VGEDERLTER VNQLLDRIEA TVKQCLRVAR TEAQAPDGAT PFVLPADYDP 
GARASLLVSY VIGRWHRFAK GGFQKPPGEQ ADAHLRLILQ