| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3085 |
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| Symbol | dapF |
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| ID | 4448518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 3398456 |
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| End bp | 3399385 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639695151 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_836726 |
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| Protein GI | 116691103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCG GCCGCCCGTG TCGTGCCGAC CGCCTTGTTC GCCATGGAAT TCCGGACCCA
GTGAAACTCT CGTTCACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC
TATTCGCGCG CGCTGCCGCC GCTCACCGAA GCGCAGGTGC GCGCACTCGC CAACCGCCAT
TTCGGCATCG GCGCCGACCA GTTGCTGCTG GTCGAGAAAC CGACCGTCGA CGGCGCGGAT
TTCAAGTACC GGATCTTCAA TTGCGACGGC GGCGAGGTCG AACACTGCGG CAACGGCGCG
CGTTGTTTCG TGAAGTTCGT CAGCGACCGC GGCCTGACCG ACCAGCGCAG CGTGCGCGTG
CAGGTCATGA AGGGCCTGAT CACGCTGACG TTGCAGGAGA ACGGCGAAGT CGTCGTCGAC
ATGGGCGCGC CCGTGTTCGC GCCGGCGCAG GTGCCGTTCG ACGCAGCGGG GCTCGACAGC
CGCAAGGAAG GCAACGACAC GCTGTGGCCG CTCGACGTGG GCGGCGCGAC GCGCTGGATT
TCGACGGTGT CGATGGGCAA TCCGCACGCG GTGCAGGTCG TCGACGACGT CGAAGCGTAT
CCGGTGCTGG AAGAAGGCCC GCTGATCGAG CGCCATGCGC GCTTCCCGCA GCGCGTGAAC
GCCGGCTTCA TGCAGATCGT GTCGCGCCAC GAAGTGAAGC TGCGCGTGTA CGAACGCGGC
GCGGGCGAGA CGCTCGCGTG CGGCACCGGC GCGTGCGCGG CGGTCGCGGC CGGCATCCGG
CGCGGCCTGC TCGATTCGCC CGTGACCGTG CACACGCACG GCGGCACGCT GACGATCGGC
TGGGACGGCG CGCGCGACGA AGCCGCCGCG CTGATGATGG CCGGCCCCGC CACGACCGTG
TTCGAAGGTG AGATCGACCT GAACGCCTGA
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| Protein sequence | MAAGRPCRAD RLVRHGIPDP VKLSFTKMHG AGNDFVVLDG YSRALPPLTE AQVRALANRH
FGIGADQLLL VEKPTVDGAD FKYRIFNCDG GEVEHCGNGA RCFVKFVSDR GLTDQRSVRV
QVMKGLITLT LQENGEVVVD MGAPVFAPAQ VPFDAAGLDS RKEGNDTLWP LDVGGATRWI
STVSMGNPHA VQVVDDVEAY PVLEEGPLIE RHARFPQRVN AGFMQIVSRH EVKLRVYERG
AGETLACGTG ACAAVAAGIR RGLLDSPVTV HTHGGTLTIG WDGARDEAAA LMMAGPATTV
FEGEIDLNA
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