Gene Bcen2424_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3066 
SymbolfliH 
ID4448059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3380313 
End bp3380996 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content75% 
IMG OID639695132 
Productflagellar assembly protein H 
Protein accessionYP_836707 
Protein GI116691084 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00102567 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT CGGCGAGCGA TCGCGTGGGC ACCCTCACCG CGTACCAGCG GTGGGAGATG 
GCGTCGTTCG ACCCGCCGCC GCCCCCGCCG CCGCCCGACG ACGCGGCGGC CGCTGCCGCC
GCGCTCGCCG AGGAATTGCA GCGCGTGCGC GACGCCGCGC ACGCCGAAGG CCATGCGGCC
GGCCACGTCG AAGGCCAGGC GCTCGGCTAC CAGGCCGGTT TCGAGCAGGG CCGCGAACAG
GGTTTCGAGG CCGGCCAGGC CGAAGCACGC GAACAGGCCG CGCAGCTCGC GGCGCTCGCC
GCGTCGTTCC GCGAAGCCGT CTCGACCGTC GAACACGATC TCGCCGCCGA CCTCGCGCAG
CTCGCGCTCG ACATCGCGCA GCAGGTCGTG CGCCAGCACG TGAAGCACGA CCCGGCCGCG
CTGGTCGCCG CCGTGCGCGA CGTGCTCGCG GCCGAACCCG CGCTGTCCGG CGCGCCGCAT
CTCGCGGTGA ATCCGGCCGA CCTGCCCGTC GTCGAGGCCT ATCTGCAGGA CGACCTCGAC
ACGCTCGGCT GGAACGTGCG CACCGACGCG TCGATCGAGC GCGGCGGCTG CCGCGCGCAC
GCCGCGACCG GCGAGGTCGA CGCGACGCTG CCCACCCGCT GGCAGCGCGT CGCCGCCGCG
ATCGGCAAGG TGAGCACGTG GTGA
 
Protein sequence
MSDSASDRVG TLTAYQRWEM ASFDPPPPPP PPDDAAAAAA ALAEELQRVR DAAHAEGHAA 
GHVEGQALGY QAGFEQGREQ GFEAGQAEAR EQAAQLAALA ASFREAVSTV EHDLAADLAQ
LALDIAQQVV RQHVKHDPAA LVAAVRDVLA AEPALSGAPH LAVNPADLPV VEAYLQDDLD
TLGWNVRTDA SIERGGCRAH AATGEVDATL PTRWQRVAAA IGKVSTW