| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3033 |
|---|
| Symbol | |
|---|
| ID | 4450914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 3345992 |
|---|
| End bp | 3346951 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639695099 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_836674 |
|---|
| Protein GI | 116691051 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCC AGACCGTCGC GCTGCTGGGC GGCACCGGCT TCATCGGCAG CCGGCTCGTC
AATGCGCTGA TCGATGCCGG CAAGCACGTG CGGATCGGTA CGCGGCGGCG CGACCACGCG
CGCCACCTGC AGATGCTGCC GGTCGACATC GTCGAGCTCG ACGCGCTCGA TACGCGCACG
CTCGCACGTT TCGTCGCCGG CGCGCACGCG GCGATCAACC TGGTCGGCGT GCTGCACGGC
GGCCGTGGCA CGCCGTACGG GCCGGGCTTC GAGCGCGCGC ACGTCGCGCT GCCGGTCGCG
CTTGCGACCG CCTGCAGCGA GGTCGGCGTG CGGCGCCTGC TGCACATGAG TGCGCTCGGT
GCCGATTCGC GCGGCGCGAG CATGTACCAG CGCTCGAAGG GCGACGGCGA AGCCGCGCTG
CATGCGGTCG CGGCCACCGA TTCGCTCGCG CTGACGATCT TCCGTCCGTC GGTCGTGTTC
GGCCCCGGCG ACGCATTCCT CAACACGTTC GCGAACCTGC AGCGCACGGT GCCCGTGCTG
CCGCTCGCGA TGCCCGACGC GCGCTTCCAG CCGGTATTCG TCGGCGACGT CGTGCGCGCG
TTCGTCAACA CCCTCGATCT CGTCGGCGCG CACGGCAAGA CCTACGAGCT CGGCGGCCCG
ACCGTCTACA CGCTCGAGCA ACTGGTGCGC TACTGCGGCA CGCTGGTCGG CCGGCAGGCA
CGCATCGTGC GGCTGCCCGA CGTGCTTGCG CGGCTGCAGG CGAGCGTGTT CGAATGCCTG
CCGGGCGAGC CGGTGCTCAC GCGCGACAAT CTCGCGACGA TGTCGGTGCC GAACGTGCTG
TCGGGGCCGC TCGCGCCGGA ACTCGGGCTC TCGCCCGCGA GTCTCGAAAG CATCGCGCCC
GCGTATCTCG GCGAAGCGAC CGGGCGCTCG CGGTTCGACT GGTTCCGCTC GCGTCGCTAG
|
|---|
| Protein sequence | MDRQTVALLG GTGFIGSRLV NALIDAGKHV RIGTRRRDHA RHLQMLPVDI VELDALDTRT
LARFVAGAHA AINLVGVLHG GRGTPYGPGF ERAHVALPVA LATACSEVGV RRLLHMSALG
ADSRGASMYQ RSKGDGEAAL HAVAATDSLA LTIFRPSVVF GPGDAFLNTF ANLQRTVPVL
PLAMPDARFQ PVFVGDVVRA FVNTLDLVGA HGKTYELGGP TVYTLEQLVR YCGTLVGRQA
RIVRLPDVLA RLQASVFECL PGEPVLTRDN LATMSVPNVL SGPLAPELGL SPASLESIAP
AYLGEATGRS RFDWFRSRR
|
|---|
| |