| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2998 |
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| Symbol | |
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| ID | 4450540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 3309545 |
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| End bp | 3310531 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639695064 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_836639 |
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| Protein GI | 116691016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.131392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACCT CCGCTTCCAC CCCTTCCGCG CCGGTGTCGG CCGGCGCCGC GCGCACCGGC
GCGGGTCATG CCCGCCGCGG CCGCTTCGCC GCGCTGTCGC GCTTCCTGCC GTCGGGCCGC
AGCGTCGCGA TCGGCGTGCC GTTCCTGTGG CTGGCCGTGT TCTTCGCGCT GCCGTTCGTG
CTGGTGCTGA AGATCAGCTT TGCCGACCAG GTGATGGGCA TCCCGCCGTA CACGTCGCTC
GTCGAGATCA AGGACGGCGT CGTGCACTTC GCGCTGCAGA TGTCGCACTA CGCGTTCCTG
CTGCAGGACG ACCTGTACAT CGCGACCTAT CTCAGCTCGC TGAAGATGGC CGCCGTGTCG
ACGGTGCTGT GTTTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG CTCGGAGCCG
AACCGCCGCA ACGTGCTGAT GATGGCCGTG ATGCTGCCGT TCTGGACCTC GTTCCTGATC
CGCGTGTACG CATGGATCGG CATCCTGAAG GACGACGGCC TGCTGAACCA CACGCTGATC
GCGCTCGGCA TCATCCACAC GCCGCTGCGG CTCTACCACA GCGATGCGGG CGTCTATATC
GGCATGGTCT ATTCGTACCT GCCGTTCATG GTGATGCCGC TCTATGCGCA CCTCGTGAAG
ATGGACCTGA CGCTGCTCGA AGCCGCGTAC GACCTCGGCG CGAAACCGTG GGTCGCGTTC
ACGCGCATCA CGCTGCCGCT GTCGAAGAAC GGGATCATCG CCGGCAGCCT GCTGGTGTTC
ATCCCGGCGG TGGGCGAGTA CGTGATCCCG GAGCTGCTCG GCGGCGCCGA CACGCTGATG
ATCGGCCGCG TGATGTGGGA TGAATTCTTC AACAACATGG ACTGGCCGAT GGCGTCCGCG
GTGACGGTCG CGATGGTGCT GCTGTTGCTG GTGCCGATGG CGCTGTTCCA GTACTACCAG
GTCAAGGAAC TGGGAGACGC GAAATGA
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| Protein sequence | MRTSASTPSA PVSAGAARTG AGHARRGRFA ALSRFLPSGR SVAIGVPFLW LAVFFALPFV
LVLKISFADQ VMGIPPYTSL VEIKDGVVHF ALQMSHYAFL LQDDLYIATY LSSLKMAAVS
TVLCLLIGYP MAYYIARSEP NRRNVLMMAV MLPFWTSFLI RVYAWIGILK DDGLLNHTLI
ALGIIHTPLR LYHSDAGVYI GMVYSYLPFM VMPLYAHLVK MDLTLLEAAY DLGAKPWVAF
TRITLPLSKN GIIAGSLLVF IPAVGEYVIP ELLGGADTLM IGRVMWDEFF NNMDWPMASA
VTVAMVLLLL VPMALFQYYQ VKELGDAK
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