| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2952 |
|---|
| Symbol | |
|---|
| ID | 4449070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 3264318 |
|---|
| End bp | 3265238 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639695018 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_836593 |
|---|
| Protein GI | 116690970 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00119284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCA TCCACCTCCC TCCGCTGCAG ACGCTGCGCG CGTTCGAAGC CGCCGTGCGG
CTGCAGAGCT TCACACGCGC GGCCGACGAA CTCGCGCTCA CGCAAGGCGC GGTCAGCCAG
CACATTCGCG CGCTCGAGGC GCAGCTCGGC TATCCGCTGT TCACGCGCGA ACGCAACGGC
GCGACGCCGA CGCACGCCGC GCATGCCCTC GCACTGCAGG TTCGCCAAGG CCTGAGCGTG
CTCGAACGCG CGTTCGAGCC GACGCTGGCG GTGCGCCGCC GCCCGCGCAC CTGCGACGTG
ACGCTGAACG TGAGCGTGCT GCCGAGCGTC GCCGAGCGCT GGCTCGTGCC GCGCCTGCCG
CGCTTCTCCG CCGCGCATCC GCACATCTCG ATCGTGCTGC ATCCGGACGT GGCGCTCGCG
CCGCTGCGCA AACGCGACCG TATCGACGTC GCATTGCGCT ACGGGCCCGG CACGTGGCCC
GGCGTCATCG CCGAGAAGCT GATGAACGAG ACGATCTTCC CGGTCGCGAG CCCTGCATAC
CGCAATCGCG ACGGCGTCGC GCCGCGCACG GCGGCCGACC TCGTACGCGC GACGTTGCTG
CGTCATCCCG CGCAGCCGTG GGAACCGTGG TGCCAGGCCG CGCGGCTCGA CCTCACCGAA
TCCGCGCGCG CGCCGCGCTT CACCGACACG AACACGCTGA TCGACGCGGC ACTGAAAGGC
CGCGGCGTCG CGCTCGCGCG CCGCTCGCTG ATCGAGCCGG AACTCGCCGA CGGCACGCTC
GTGCGCGTGT CGACGGTACG CATCACCGAC GTGTACGCGC ACTACGTCGT GTGGCGCCCC
GGCCATCCGC ACGAAGCCGC GATCCACACC TGGCTCGACT GGCTGCGCAG CGAAGTGCGG
CGCAGGACGC CGCGGCGCTG A
|
|---|
| Protein sequence | MRRIHLPPLQ TLRAFEAAVR LQSFTRAADE LALTQGAVSQ HIRALEAQLG YPLFTRERNG
ATPTHAAHAL ALQVRQGLSV LERAFEPTLA VRRRPRTCDV TLNVSVLPSV AERWLVPRLP
RFSAAHPHIS IVLHPDVALA PLRKRDRIDV ALRYGPGTWP GVIAEKLMNE TIFPVASPAY
RNRDGVAPRT AADLVRATLL RHPAQPWEPW CQAARLDLTE SARAPRFTDT NTLIDAALKG
RGVALARRSL IEPELADGTL VRVSTVRITD VYAHYVVWRP GHPHEAAIHT WLDWLRSEVR
RRTPRR
|
|---|
| |