Gene Bcen2424_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2886 
Symbol 
ID4450483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand- 
Start bp3190338 
End bp3191354 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID639694952 
Producttaurine ABC transporter, periplasmic binding protein 
Protein accessionYP_836527 
Protein GI116690904 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4521] ABC-type taurine transport system, periplasmic component 
TIGRFAM ID[TIGR01729] taurine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTT TCAGCTTCAT CCGCCGCGCC GTCGTCGCGT TGACCGCCTT TGCCGCGCTC 
GGCGCGGCGC ACGCCGAATC GCGCGAAGTC GTGATCGCGT ACCAGGACAT GGTCGTGCCG 
TGGCGCTACG CGCAGGCGAG CGGTGAAGTC GAAAAGGCGA CCGGCTACAA GGTCACGTTC 
CGCAAGCTCG ACAGCGGCGC CGACGTGATC CGCGCGCTCG CGTCGGGCTC CGTGCAGCTT 
GGCGAAGCCG GGTCGAGCCC GATCGCGGCC GGCCTGTCGC AGGGGCTCGA CATCTCGCTG 
TTCTGGGTGC TCGACAACAT CAACGACGCC GAGGCGCTCG TCGCGCGCAA TGGTTCGGGC 
GTGACCAGCA TCGCCGCGCT CAAGGGCAAG AAGATCGGCG TGCCGTTCGT GTCGACGTCG 
CATTTCCATA CGCTCGTCGC GCTGCAGGCC GCGGGCGTCA ATCCGAACGA CGTGAAGATC 
GTCAACCTGC GTCCGCCCGA AGTCGCCGCC GCATGGACGC GCGGCGACAT CGACGCGACC 
TATATCTGGG ACCCGGTGCT CGCGAAGGTC AAGCAGTCGG GCACCGTGCT GACGACGTCC 
GGCCAGGTTG CGAAAGAAAG TGGCAAGGCG ACCTTCGACG GCTTCGTCGT GAGCCGCAAG 
TTCGCGCGCG AGAACCCCGA GTTCGTCACG CGCTTCGTGA AGGTGCTCGC GGCGGCGGAC 
GCCGACTACC GCGCGCACGC GGCGGCGTGG AAGGTCGGCT CGCCGCAGGT CGCGGCGGTC 
GCGAAGGTGT CCGGCGCGAA CGCGCAGGAC GTGCCGGCCA GCCTCGCGCT CTACGCATTC 
CCGACGGCGG CCGAACAGGC ATCGCCGACG TGGCTCGGCG GCGGCGCGCA ATCGGGCGCC 
GTGAAGTCGC TCGCGGCCAC GGCCACGTTC CTCAAATCGC AAGGCACGAT CCAGACGGTG 
CTGTCCGACT ATTCGGTCGG CGTCGATCCG CAGTTCGTGC AGAAGGCCGC GCGCTGA
 
Protein sequence
MSRFSFIRRA VVALTAFAAL GAAHAESREV VIAYQDMVVP WRYAQASGEV EKATGYKVTF 
RKLDSGADVI RALASGSVQL GEAGSSPIAA GLSQGLDISL FWVLDNINDA EALVARNGSG 
VTSIAALKGK KIGVPFVSTS HFHTLVALQA AGVNPNDVKI VNLRPPEVAA AWTRGDIDAT 
YIWDPVLAKV KQSGTVLTTS GQVAKESGKA TFDGFVVSRK FARENPEFVT RFVKVLAAAD 
ADYRAHAAAW KVGSPQVAAV AKVSGANAQD VPASLALYAF PTAAEQASPT WLGGGAQSGA 
VKSLAATATF LKSQGTIQTV LSDYSVGVDP QFVQKAAR