| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2825 |
|---|
| Symbol | |
|---|
| ID | 4449670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 3125460 |
|---|
| End bp | 3126194 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639694893 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_836468 |
|---|
| Protein GI | 116690845 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.214074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG GCTGGTCCGA ACTGGCGCCC GACCCCCTCG ACGACACGCC GCTCTATTTG
CAGCTCGCCC GCAATCTGGC GAGCGCGATC CACGCCGGCG CGTGGCGGGC CGGCGAGGCG
CTGCCGTCGG AGCGGCTGCT GTCGGGGTCG GTCGGCGTGT CGCGAATCAC CGCGCGTCGT
GCGCTCGCGC TGCTGGTCGA GCAGGGCCTG ATCAAGCGAG CGCGCGGCGC GGGCAGCTTC
ATCACGCCGC GCGTCGCCGA TCCGCTGTCG CGGCTCGTCG GCTTCACCGC GAAGATGCAG
CAGCGCGGCT TCGTGCCCGA TTCGGTGTGG CTGTCGCGCA CGCTGCGCGC CGCGAGCCGT
GACGAGCTCA CGCATCTCGG CCTCGCGCCC GGCGCGACGG TGGCGCGGCT CGAACGGCTG
CGCCGCGCGG ACGGCATCGT GATGGCCATC GAGCATTCGA CGCTGCCGGC CGCGGTGGTG
CCCGATCCGC AGGCGCTCGG CGCGTCGCTG TACGAATACC TCGATACGCG CGGCATGACC
GTCGTGCGCG CGCTGCAGCA CTTTCGCGCG GCGAATGCCA CGCACGCGAT CGCGAAATGG
ATGGCGGTGA AGCCGGGCTC GGCATTGCTG GTGATCACGC GCGTCGGCTA CGGCGCCGAC
CAGCGTGCGA TCGAAGTGAC CGAAACGTAT TGCCGCGACG ACTACTACGA CTTCGTCGCC
GAACTGAAAC GCTGA
|
|---|
| Protein sequence | METGWSELAP DPLDDTPLYL QLARNLASAI HAGAWRAGEA LPSERLLSGS VGVSRITARR
ALALLVEQGL IKRARGAGSF ITPRVADPLS RLVGFTAKMQ QRGFVPDSVW LSRTLRAASR
DELTHLGLAP GATVARLERL RRADGIVMAI EHSTLPAAVV PDPQALGASL YEYLDTRGMT
VVRALQHFRA ANATHAIAKW MAVKPGSALL VITRVGYGAD QRAIEVTETY CRDDYYDFVA
ELKR
|
|---|
| |