| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2799 |
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| Symbol | |
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| ID | 4449539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 3095381 |
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| End bp | 3097204 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639694866 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_836442 |
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| Protein GI | 116690819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.414914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGC CCTCGAAGCT GCTTCAGGAG CGCCCCGCCG CCGTGCGCGG CGCGCGCGCC
TTCCCGGTCC GCCGTGCACT CGGTGCCGCG CTGTTTGCCG TCTGGACCCT CACCGCCTTT
CCGGCCCACG CGCAGGATCC GGCATCGGAC GACGCGGAGC CGCAGGGTGC GTTCGAGCAT
GTGATGCCGG ACGAGCAGAA AAATCTCCCC GGCGTGCCTC TGACGAGCCA GATCGTCTAC
CAGGTGCTCG CCGCCGAGGT CGCGCTCCAG CGCAATCAGC CGGCGCCGGC CTACCAGACC
TACCTCGCGC TGGCCCGCGA CACGCGCGAT CCGCGCATGG CGCAGCGCGC GACCGAAATC
GCGCTCGGCG CGCAGAGCCC GGCCGACGCG CTGTCCGCCG CGAACCTGTG GCGTCAGTAC
GCACCGGATT CGAACCGGGC GTCGCAGGTC GACGCCGCGC TGCTGGTGCT CGCCGGCAAG
CCGGCCGACG CGCAGCCGAT GCTCGCGCGC GAGCTGGCCC GCGCGAGCGG CGACACGCGC
GGCCCGGCGA TCCTCGCGCT GCAGGCGCTG CTCGTGCGCG GCCCCGACCG CGTCGGCGGC
CTCGCGGTGC TGAAGGATAT GCTGAAGAAC GACATGAATC GCCCCGAGGC GCAGCTCGCG
ATCGCGCGGC AGCAGCTCGC GGTCGACGAC AAGGACGGCG CCGCGCAGTC GCTGAAGCAG
GCGCTGCAGC TCCGCCCCGA CTACCTGCCG GCAGCGCTGA TGCTGTCGCA GATGGGGCCG
GCGGAACGTG CGGCGGGCAT CGCGTCGTTC GAGAAGTATG TTCAGCAGAA TCCGAAGTCG
CGCGACGCGC GGCTCGCGCT GTCGCAGCTC TATCTCGCCG ACGATCGCCT CGACGACGCG
CAGAAGCAGT TCGAGACGAT GCGCAAGCTC GACGCGAAGG ACCCGACGCC GCTGATGGCG
CTCGCGCTGA TCAAGATCCA GCAGAAGAAA CTCGACGAGG CGACCGGCTA CCTGAAGCAG
TACGTGCAGC TCGGCGACAA GCAGCCGAAC CTCGACGTCG GCCAGGGCTA CATCTATCTC
GCGCAGATCG CGATCGACCA GAACAACGAC GCGCAGGCGT CGCAATGGCT CGACAAGGTC
GACCAGACGA GCCAGCACTA CCTGCCCGCG CAGATCACGC GTGCGCAGCT CCTGCAGAAA
CAGGGCAAGA CCGACGAGGC GCGCAAGGTG CTCGACAACC TGCCGATCTC GGATCCGCGC
GATGCGGCCG TGGTGGCGCG CACCGATGCG TCGATCCTGT TCACGGCGAA GCGCTATCCG
GAAGCGGAGG CGCGGCTCGG GCAGGCCGTC CAGGACTTCC CGGACGACCC CGACCTGCGC
TACGACTACG CGATGGCGGC CGAAAAGACC GGCCACTACG CGACGATGGA AAAGCAACTG
CGCGAGCTGA TCCGTACGCA GCCCGACAAC CCGCAGGCCT ACAACGCGCT CGGCTATTCG
CTCGCCGATC GCAACCAGCG CCTGCCCGAG GCCAGCAAGC TGATCGACAA GGCGATGGCG
CTCGCGCCGA ACGACGCGTA CATCATGGAC AGCCTCGGCT GGGTGAAGTA CCGGATGGGC
GACACGGCCG GGGCGACGAA GGTGCTGCAG CGTGCATACG AACTGCAGCC GAACGCCGAA
ATCGGCGCGC ATCTCGGCGA AGTGCTGTGG AAGAGCGGCG CGCAGGACGA CGCGCGCAAC
GCGTGGCGTG CCGCGCAGAA GCTCGAGCCC GACAACGAAA CGCTCGTGCA GACGCTGAAA
CGCCTGCAGA TCAACGGCCT CTGA
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| Protein sequence | MTLPSKLLQE RPAAVRGARA FPVRRALGAA LFAVWTLTAF PAHAQDPASD DAEPQGAFEH
VMPDEQKNLP GVPLTSQIVY QVLAAEVALQ RNQPAPAYQT YLALARDTRD PRMAQRATEI
ALGAQSPADA LSAANLWRQY APDSNRASQV DAALLVLAGK PADAQPMLAR ELARASGDTR
GPAILALQAL LVRGPDRVGG LAVLKDMLKN DMNRPEAQLA IARQQLAVDD KDGAAQSLKQ
ALQLRPDYLP AALMLSQMGP AERAAGIASF EKYVQQNPKS RDARLALSQL YLADDRLDDA
QKQFETMRKL DAKDPTPLMA LALIKIQQKK LDEATGYLKQ YVQLGDKQPN LDVGQGYIYL
AQIAIDQNND AQASQWLDKV DQTSQHYLPA QITRAQLLQK QGKTDEARKV LDNLPISDPR
DAAVVARTDA SILFTAKRYP EAEARLGQAV QDFPDDPDLR YDYAMAAEKT GHYATMEKQL
RELIRTQPDN PQAYNALGYS LADRNQRLPE ASKLIDKAMA LAPNDAYIMD SLGWVKYRMG
DTAGATKVLQ RAYELQPNAE IGAHLGEVLW KSGAQDDARN AWRAAQKLEP DNETLVQTLK
RLQINGL
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