Gene Bcen2424_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2778 
Symbol 
ID4448347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3072768 
End bp3073955 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID639694845 
Productmajor facilitator transporter 
Protein accessionYP_836421 
Protein GI116690798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC CGTCTGCCAC GTCTTCCCGC ATGACTGCGC CCGAACTGCG CGCGACCACG 
TCGCTCGCGG CGATCTTCGC GTTGCGCATG CTCGGCCTGT TCATGATCAT GCCGGTGTTC
TCGGTCTATG CGAAAACCAT CCCGGGCGGC GACAACGTGC TGCTCGTCGG GATCGCGCTC
GGGGCCTACG GCGTCACGCA GTCGCTGTTC TATATCTTCT ACGGCTGGGC GTCCGACAAG
TTCGGCCGCA AGCCGGTGAT CGCCACGGGC CTCGTGATCT TCGCGCTCGG CAGCTTCGTC
GCCGCGTTCG CGCACGACAT CACGTGGATC ATCGTCGGCC GCGTGATCCA GGGGATGGGC
GCCGTGTCGT CGGCGGTGCT CGCGTTCATC GCCGACCTGA CCTCCGAGCA GAACCGCACG
AAGGCGATGG CGATGGTCGG CGGCTCGATC GGCGTGTCGT TCGCGGTCGC GATCGTCGGT
GCGCCGATCG TGTTCCACTG GGTCGGGATG AGCGGGCTGT TCACGATCGT CGGCGTGCTG
TCGATCCTCG CGATCGGCGT CGTGCTGTGG ATCGTGCCCG ACGCGGCGAA GCCCGTCCAC
GTGCGCGCGC CGTTCGCCGA GGTGCTGCAC AACGTCGAGC TGCTGCGCCT GAACTTCGGC
GTGCTGGTGC TGCATGCGAC GCAGACGGCG CTGTTCCTGG TCGTGCCGCG CCTCTTGGTC
GACGGCGGGC TGCCGGTCGC TGCACACTGG AAGGTCTACC TGCCGGTGAT GGGGCTCGCG
TTCGTGATGA TGGTGCCGGC GATCATCGTC GCGGAAAAAC GGGGCAAGAT GAAGCCGGTG
CTGCTCGGCG GCATTCTGGC TATCCTGATC GGCCAATTGT TGCTCGGCAG CGCACCGCAT
ACCATTCTGA TTGTGGCGGC GATCCTCTTC GTCTACTTCC TCGGCTTCAA CATCCTGGAA
GCGTCGCAGC CGTCGCTCGT GTCGAAGCTC GCGCCGGGTT CGCGCAAGGG CGCGGCCACG
GGTGTCTACA ACACCACGCA GTCGATCGGG CTCGCGCTCG GCGGCATCGT GGGCGGCTGG
CTGCTGAAGC ACGGCGGCGC GAACACGGTC TTTTATACCT GTTCGGGGCT CGTTGCCGCG
TGGCTTATAA TCGCGGCCAA TATGAAGGCG CCGCCGCGCA AGGCCTGA
 
Protein sequence
MSNPSATSSR MTAPELRATT SLAAIFALRM LGLFMIMPVF SVYAKTIPGG DNVLLVGIAL 
GAYGVTQSLF YIFYGWASDK FGRKPVIATG LVIFALGSFV AAFAHDITWI IVGRVIQGMG
AVSSAVLAFI ADLTSEQNRT KAMAMVGGSI GVSFAVAIVG APIVFHWVGM SGLFTIVGVL
SILAIGVVLW IVPDAAKPVH VRAPFAEVLH NVELLRLNFG VLVLHATQTA LFLVVPRLLV
DGGLPVAAHW KVYLPVMGLA FVMMVPAIIV AEKRGKMKPV LLGGILAILI GQLLLGSAPH
TILIVAAILF VYFLGFNILE ASQPSLVSKL APGSRKGAAT GVYNTTQSIG LALGGIVGGW
LLKHGGANTV FYTCSGLVAA WLIIAANMKA PPRKA