| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2720 |
|---|
| Symbol | |
|---|
| ID | 4451037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 3012702 |
|---|
| End bp | 3015137 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639694787 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_836363 |
|---|
| Protein GI | 116690740 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATT TCCTGATTCG CAAGGTCGCC GTGCTGGGCG CCGGCGTGAT GGGCGCGCAG
ATCGCCGCGC ATCTCGTCAA CGCGCGCGTG CCGGTGCTGC TGTTCGACCT GCCGGCCAAG
GAAGGCCCGA AAAACGCGAT TGCGCTGAAG GCGATCGAAA ACCTGAAGAA GCTGTCGCCC
GCGCCGTTCG GCGTGAAGGA CGATGCGAAG TACCTCGAGG CGGCGAACTA CGAAGACGAC
ATCGCGAAGC TCGCCGAATG CGACGTCGTG ATCGAAGCGA TCGCCGAGCG GATGGACTGG
AAACACGACC TGTACAAGAA GGTCGCGCCG CACATCGCGC CGAACGCGAT CTTCGCGACC
AACACGTCGG GCCTGTCGAT CACGAAGCTG TCCGAAGGTT TCTCGGACGA GTTGAAGGCG
CGCTTCTGCG GCGTGCACTT CTTCAACCCG CCGCGCTACA TGCACCTCGT CGAGCTGATC
CCGACCGCGC ATACGCGTCC GGAAATCCTC GACCAGCTCG AAACCTTCCT GACGAGCGTC
GTCGGCAAGG GCGTCGTGCG CGCGAAGGAC ACGCCGAACT TCATCGCGAA CCGCGTCGGC
ATCTTCTCGA TCCTCGCGGT GATCACCGAG GCCGCGAAGT TCGGCCTGCG CTTCGACGAA
GTCGACGATC TGACCGGCAG CCGCCTCGGC CGCGCGAAGT CGGCGACGTT CCGCACCGCG
GACGTGGTCG GCCTCGACAC GATGGCGCAC GTGATCAAGA CGATGCAGGA CAACCTCGCC
GACGATCCGT TCTTCCCGGT CTACCAGACG CCCGCCGTGC TCGCCGAACT GGTGAAGCAG
GGCGCGCTCG GCCAGAAGAC GGGCGGCGGG TTCTACAAGA AGGAAGGCAA GGCGATCAAG
GTACTCGACG CGAAGACGGG CAGCTACGTC GATTCGGGCG CGAAGGCGGA CGAAACGGTC
GGCCGCATCC TGAAGCGCCC GCCGGCGGAA CGCCTGAAGC TGCTGCGCGA GACGGATCAT
CCGCACGCGC AGTTCCTGTG GTCGATCTTC CGCGACGTGT TCCACTACAT CGGCGTGCAT
CTCGAGTCGA TCGCCGACAA CGCGCGCGAC GTCGACCTCG CGATCCGCTG GGGCTTCGGC
TGGAACGAAG GCCCGTTCGA AGGCTGGCAG GCGGCCGGCT GGAAGCAGGT CGCCGAGTGG
GTGCAGGAAG ACATCGCGGC CGGCAAGGCG CTCGCGAACG TGCCGCTGCC GTCGTGGGTG
CTCGAGGGCC CGGTCGCCGA GCAGGGCGGC GTGCACACGG CCGAAGGCTC GTGGGCACCG
GCATCGAAGC GCTTCGTGCC GCGTTCGGAC CTGGCCGTGT ACCGCAAGCA GGTGTTCCGC
GCGCCGCTGC TGGGCGAAGC GGGCGCCGAT CCGAAGACGT ACGGCAAGAC GCTGTTCGAA
ACCGACGCGG TGCGCGCGTG GGTCGACGAT CGTGCCGGTG AAGACGACGT CGTGATCGTG
TCGTTCAAGT CGAAGATGAA CACGATCGGA CCGAGCGTGA TCGACGGCCT CGTGCAGGCG
ATCGAGCTCG CGGAGAAGGA CTACAAGGGC GTGGTGATCT GGCAGCCGAC GTCGCTGAAG
CTCGGCACGC CGGGCGGCCC GTTCTCGGCC GGCGCGAACC TCGAGGAGGC GATGCCCGCG
TTCATGATGG GCGGCGCGAA GGGCATCGAG CCGTTCGTGA AGAAGTTCCA GGAAGGCATG
CTGCGCGTGA AGTACGCGAA CGTGCCGGTC GTGGCAGCCG TGTCGGGCAT CGCGCTCGGC
GGCGGGTGCG AGCTGATGCT GCACAGCGCG AAGCGCGTCG TGCACGTCGA GAGCTACATC
GGCCTCGTCG AAGTGGGCGT CGGCCTCGTG CCGGCCGGCG GCGGCCTGAA GGAAGCGGCG
CTGCGCGCGG CGGACGCCGC GACGGCCGCG AACGCGACCA CCGACATCCT GAAGTTCGTC
ACGAAGTCGT TCGAGAACGC GGCGATGGCG AAGGTGTCGG CGTCCGCGCA CGACGCACGG
GCGATGGGCT ACGTGAAGCC GTCCGACACG ATCGTCTTCA ACGTGTTCGA ACTGCTCGAC
ACCGCGAAGA AGGAAGCGCG TGCGCTGGCC GACACCGGCT ACCGCGCACC GCTGCGCGCG
AAGGACGTGC CGGTCGCGGG CCGTTCGGCG ATCGCGACGA TCAAGGCATC GCTCGTCAAC
ATGCGTGACG GCCGCTTCAT CAGCGACCAC GACTACCTGA TCGCGAGCCG CATCGCCGAA
GCCGTGTGCG GCGGCGACGT CGAAGCCGGC AGCCTCGTCG ACGAAGAATG GCTGCTCGCG
CTGGAGCGCC GCGCGTTCGT CGAGCTGCTC GGTACGCAGA AGACGCAGGA ACGGATCATG
GGCATGTTGC AGACCGGCAA GCCGGTGCGT AACTGA
|
|---|
| Protein sequence | MSNFLIRKVA VLGAGVMGAQ IAAHLVNARV PVLLFDLPAK EGPKNAIALK AIENLKKLSP
APFGVKDDAK YLEAANYEDD IAKLAECDVV IEAIAERMDW KHDLYKKVAP HIAPNAIFAT
NTSGLSITKL SEGFSDELKA RFCGVHFFNP PRYMHLVELI PTAHTRPEIL DQLETFLTSV
VGKGVVRAKD TPNFIANRVG IFSILAVITE AAKFGLRFDE VDDLTGSRLG RAKSATFRTA
DVVGLDTMAH VIKTMQDNLA DDPFFPVYQT PAVLAELVKQ GALGQKTGGG FYKKEGKAIK
VLDAKTGSYV DSGAKADETV GRILKRPPAE RLKLLRETDH PHAQFLWSIF RDVFHYIGVH
LESIADNARD VDLAIRWGFG WNEGPFEGWQ AAGWKQVAEW VQEDIAAGKA LANVPLPSWV
LEGPVAEQGG VHTAEGSWAP ASKRFVPRSD LAVYRKQVFR APLLGEAGAD PKTYGKTLFE
TDAVRAWVDD RAGEDDVVIV SFKSKMNTIG PSVIDGLVQA IELAEKDYKG VVIWQPTSLK
LGTPGGPFSA GANLEEAMPA FMMGGAKGIE PFVKKFQEGM LRVKYANVPV VAAVSGIALG
GGCELMLHSA KRVVHVESYI GLVEVGVGLV PAGGGLKEAA LRAADAATAA NATTDILKFV
TKSFENAAMA KVSASAHDAR AMGYVKPSDT IVFNVFELLD TAKKEARALA DTGYRAPLRA
KDVPVAGRSA IATIKASLVN MRDGRFISDH DYLIASRIAE AVCGGDVEAG SLVDEEWLLA
LERRAFVELL GTQKTQERIM GMLQTGKPVR N
|
|---|
| |