| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2592 |
|---|
| Symbol | |
|---|
| ID | 4450145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2870140 |
|---|
| End bp | 2870853 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639694658 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_836235 |
|---|
| Protein GI | 116690612 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.119238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG CAAGCAAAGG CGCGGCCGGT CACGGCGTGA ACGTGCTGAT CTGCGATTGC
GACGGCGTGC TGATCGACAG CGAGGCCGTG GCCGCCGACG TGATCGTGCG CGAACTCGAT
GCGCGCTGGC CGGGCGTCGA TGCGCGGCCG GCCGTGATGC CGCTGCTCGG GCTGCGCATC
GAGCGCGTGC TAGCTGGCGC GAGCGACGCG GTCGGCCGCA CGCTGTCGGC CGACGACGTC
GACGCGATCC GCCGCGCGGT TGAGGCGGCG GCCGTCAACG CGCCGATGGT CGACGGCATC
GATGCGGCGC TGGCCGCGAT CGACCTGACG ACGGCGTGCG CGAGCAACAG CTATCGCGCG
TACGTCGAAG CGGCGCTCGC GCGCACCGGC CTCGCGCGCT TTTTCGGCGA CCGGTTGTTC
TGCGCGGATT CGGTCGCGCG GCCGAAGCCG GCGCCCGACG TGTATCTGGC AGCCGCACGC
GCGCTCGGCG TGGTGCCCGC GCAATGCCTG GTGGTCGAGG ACAGCGTGAC CGGCATCACC
GCGGCGGCCG CGGCCGGCAT GACCGTGCTC GGCTTCGTCG GCGGCGGGCA CGCGTCGGCG
GCGCAGATCG ACGCGTTGCG CGGCATCGGC GCGCGGCACG TATTCGACGA CATGCACGAG
CTGCCCGGCT ACGTCGCGCG CTGGCAGGCG ACGGGCGCGG TGCTGCCGAA CTAG
|
|---|
| Protein sequence | MSGASKGAAG HGVNVLICDC DGVLIDSEAV AADVIVRELD ARWPGVDARP AVMPLLGLRI
ERVLAGASDA VGRTLSADDV DAIRRAVEAA AVNAPMVDGI DAALAAIDLT TACASNSYRA
YVEAALARTG LARFFGDRLF CADSVARPKP APDVYLAAAR ALGVVPAQCL VVEDSVTGIT
AAAAAGMTVL GFVGGGHASA AQIDALRGIG ARHVFDDMHE LPGYVARWQA TGAVLPN
|
|---|
| |