| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2307 |
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| Symbol | |
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| ID | 4449780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2561114 |
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| End bp | 2562865 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639694371 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_835951 |
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| Protein GI | 116690328 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGCA CCGGCACCTC GCCGATGACG GTCCTCAAGC GCCTGTGGCC GTACATCCGG
CCGCTCATCG GCATCGTGGT GCTCGCCGTG GTGACGATGG GCGTCGTCGC GGCCACCGAG
GCCGGTATCC CGGCCCTGCT CAAGCCGCTG CTCGACCACG GCTTCGGCTC GCACGGCAGC
GACAGCGCGA AATGGTACGT GCCGATCGCG GTGATCGGGC TCGCGCTCGT GCGCGGCGTG
TCGCAGTACA CATCGAATTA CCTGCTCAAC TACGTATCGA ACCGCATCCT GCTGCAGCTG
CGGCTCGAGA TGTTCCAGCG GATGATCCAT ACCGGCGCGT CGTTCTTCCA GCGCGAAACC
GCGAGCACGG TGATCAACGC GATCGTGTTC GAGGTCAACC AGATCCTGTC GGTGCTGACG
GGCGTGATGG TCACGCTCGT GCGCGATTCG CTGACGGTGA TCTTCCTGCT CGGCTACCTG
TTCTACCTGA ACTGGCGGCT CACGCTGATC GTCGCGGTGA TCCTGCCGGG CATCGGCTGG
CTCGTCAGCA AGATCAACCG CCGGCTGCGC CGCCTGAACC GCGAGCACCA GACGCTGACC
AACGAGCTGT CGTACATCGT CGAGGAGACG GTCGGCGGCT ACAAGGTCGT CAAGGTGCAC
AACGGCGAAG CGTACGAGAT GGACCGCTTC ACGACGATGA GCAAGCGCCT GCGCGGCTAC
GCGATGCGCA TGACGATCTC GGGCGGCCTC GCGCAGCCGC TCACGCAGTT CCTCGCGTCG
ATCGCGCTCG CGGTCGTGAT CACGATCGCG GTCGTGCAGT CGTCGAACGA CCAGACGACG
GTCGGCGGTT TCGTCGCGTT CGTCACGTCG ATGCTGCTGG TGATCTCGCC GCTCAAGCAC
CTGATCGACG TCAACCAGCC GCTGCAGCGC GGGATGACGG CCGCCGAGCT GATCTTCGGG
CTGATCGACG AGCCGGCCGA GCCGCAGGGC GGCGGGCGGC CGCTGTCGCA GGCGCGCGGC
GAGATCGAGT TCCGCGCCGT GTCGTTCGAC TACGGCGCGG CCGAACGGCC GACGCTCGAC
CGCATTTCGT TCAAGGTCGC GCCGGGTGAA ATGATCGCGC TGGCCGGCCC GTCCGGGAGC
GGCAAGACGA CGCTCGTGAA CCTGCTGCCG CGCTTCTTCG ACCCGACGGA CGGCACGATC
CTGGTCGACG GCGTGCCGGT GTCCGACTAC GATCTCCACG CGCTGCGCAG CCAGATGGCA
ATGGTCAGCC AGGACGTCGT GCTGTTCAAC GACACGATCG CCGCGAACGT CGCCTACGGG
CAGACGCCCG ACCGCGCACG CGTGCAGGCC GCGCTCGAGG CCGCGAACCT CGCCGATGCG
GTCGCCGCGA TGCCCGACGG GCTCGATACG CTGGTCGGCG GCAACGGGAT GCGGTTGTCC
GGCGGCCAGC GCCAGCGGCT CGCGATTGCG CGCGCGATCT ACAAGGACGC GCCGATCCTG
ATCCTCGACG AAGCGACGTC GGCGCTCGAT TCGGAGTCGG AGCGCCACGT GCAGGCCGCG
CTCGAGCGGC TGATGGAAGG CCGCACGACG CTGGTGATCG CGCACCGGCT GTCGACGATC
GAGCGCGCGG ACCGCATCCT CGTGCTCGAG GCCGGCAAGA TCGTCGAGGA GGGCAGCCAC
GACGAACTGC TGCGCCACGG CGGCCTCTAC GCGCACCTGC ACCGGATCCA GTACCAGCAG
CAGGCGGCGT GA
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| Protein sequence | MDGTGTSPMT VLKRLWPYIR PLIGIVVLAV VTMGVVAATE AGIPALLKPL LDHGFGSHGS
DSAKWYVPIA VIGLALVRGV SQYTSNYLLN YVSNRILLQL RLEMFQRMIH TGASFFQRET
ASTVINAIVF EVNQILSVLT GVMVTLVRDS LTVIFLLGYL FYLNWRLTLI VAVILPGIGW
LVSKINRRLR RLNREHQTLT NELSYIVEET VGGYKVVKVH NGEAYEMDRF TTMSKRLRGY
AMRMTISGGL AQPLTQFLAS IALAVVITIA VVQSSNDQTT VGGFVAFVTS MLLVISPLKH
LIDVNQPLQR GMTAAELIFG LIDEPAEPQG GGRPLSQARG EIEFRAVSFD YGAAERPTLD
RISFKVAPGE MIALAGPSGS GKTTLVNLLP RFFDPTDGTI LVDGVPVSDY DLHALRSQMA
MVSQDVVLFN DTIAANVAYG QTPDRARVQA ALEAANLADA VAAMPDGLDT LVGGNGMRLS
GGQRQRLAIA RAIYKDAPIL ILDEATSALD SESERHVQAA LERLMEGRTT LVIAHRLSTI
ERADRILVLE AGKIVEEGSH DELLRHGGLY AHLHRIQYQQ QAA
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