Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2114 |
Symbol | |
ID | 4449276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2345948 |
End bp | 2347201 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639694169 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_835758 |
Protein GI | 116690135 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.08589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTTC CGTACGAATG GCAGATCGGC TGGCGCTACA CGCGCGCCGG CAAACGCACG ACCGGCAACG GCTTCATTTC CTTCATCGCG CTCGTCTCGA TGCTCGGGAT CGCGCTCGGC GTCGCGGCGC TGATCGTCGT GCTGTCGGTG ATGAACGGCT TCCAGAAGGA AGTGCGCGAC CGCATGCTGT CGGTGCTCGC GCACGTCGAG GTATTCTCGC CGACGGGGTC GATGCCCGAC TGGCAACTGA CCGCGCAGGA AGCGCGCCGC AATCCGTCGG TGATCGGCGC CGCGCCGTAC GTCGACGCGC AGGCGCTGCT CACGCGCCAG GACGCCGTGA GCGGCGTGAT GCTGCGCGGC GTCGAGCCGT CGCTCGAGCC GCAGGTGTCC GACATCGGCA AGGACATGAA GGCCGGCCAG CTCGGCGCGC TCGTGCCGGG CCAGTTCGGC ATCGTGCTCG GCGACGCGCT CGCCGGCAAC CTCGGCGTGA CGGTCGGCGA CAAGGTCACG CTCGTCGCGC CCGAAGGCTC GATCACGCCG GCCGGGATGA TGCCGCGCCT GAAGCAGTTC ACGGTGGTCG GCGTGTTCGA GTCGGGCCAC TACGAATACG ACAGCACGCT CGCGATGATC AACATCCGCG ACGCCGAGGC GCTGTTCCGG ATGAGCGCGC CGACCGGCGT GCGGCTGCGG CTCACCGATA TGCAGAAGGC GCCGCAAGTC GCGGTCGAGC TGTCGCATAC GCTGTCGGGC AGCCTGTACA TTCGCGACTG GACCCAGCAG AACAAGACGT GGTTCTCGGC CGTGCAGATC GAGAAGCGGA TGATGTTCAT CATCCTCACG CTGATCATCG CGGTGGCCGC GTTCAACCTC GTGTCGTCGC TCGTGATGAC GGTGACCAAC AAGCAGGCCG ACATCGCGAT CCTGCGCACG CTCGGCGCGC AGCCGGGGTC GATCATGAAG ATCTTCGTCG TGCAGGGCGT GACGATCGGC TTCGTCGGCA CCGCGTCCGG CGTCGCGCTC GGCTGCCTGA TCGCGTGGAG CATCCCGTGG CTGATCCCGA TGATCGAGCA CCTGTTCGGC GTGCAGTTCC TGCCGCCGTC GGTGTATTTC ATCAGCGAGC TACCGTCCGA ACTCGTCGCG AGCGACGTGA TCCGGATCGG GCTGATCGCG TTCGCGCTGT CGGCCGTCGC GACGCTTTAT CCGAGCTGGC GCGGCGCGAA GGTGAAGCCG GCGGAGGCGC TCCGCTATGA ATGA
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Protein sequence | MKLPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMLGIALG VAALIVVLSV MNGFQKEVRD RMLSVLAHVE VFSPTGSMPD WQLTAQEARR NPSVIGAAPY VDAQALLTRQ DAVSGVMLRG VEPSLEPQVS DIGKDMKAGQ LGALVPGQFG IVLGDALAGN LGVTVGDKVT LVAPEGSITP AGMMPRLKQF TVVGVFESGH YEYDSTLAMI NIRDAEALFR MSAPTGVRLR LTDMQKAPQV AVELSHTLSG SLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN KQADIAILRT LGAQPGSIMK IFVVQGVTIG FVGTASGVAL GCLIAWSIPW LIPMIEHLFG VQFLPPSVYF ISELPSELVA SDVIRIGLIA FALSAVATLY PSWRGAKVKP AEALRYE
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