Gene Bcen2424_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2024 
Symbol 
ID4448980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2242818 
End bp2244893 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content68% 
IMG OID639694071 
ProductDNA ligase, NAD-dependent 
Protein accessionYP_835668 
Protein GI116690045 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID[TIGR00575] DNA ligase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGAA CCCAAGCCGA ACCGCCAGCC AGCCAGCCCG ACGCGCGCGC CGCGTGGCTG 
CGCGACCAAC TCGAGCGGGC GAACTACGCC TACTACGTGC TCGACCAGCC GGATCTGCCC
GACGCCGAAT ACGACCGGCT GTTCCGCGAG TTGCAGCAGC TCGAAACCGA CCATCCCGAA
CTCGTGACAC CCGATTCGCC GACGCAGCGT GTCGGCGGCG AAGCGGCCGG CGGCTTCACG
CCGGTCGTCC ACGATGCGCC GATGCTGTCG CTGAACAACG GCTTTGCCGA CGAGGACATC
GTCGCGTTCG ACAAGCGCGT CGCCGACGCG CTCGCCAAGA CGACCGATCT GGCCGGCTCG
GTGACCGACC CCGTCGAATA CGCGTGCGAA CTGAAGTTCG ACGGCCTGGC GATCTCGCTG
CGCTACGAGC AAGGCGTGTT CGTGCAGGCC GCGACGCGTG GCGACGGGAC GACGGGCGAG
GACGTGACCG AGAACGTGCG CACGATCCGC TCGATTCCGC TGAAGCTGAA GGGCAAGCAC
GTGCCGGCGG TGCTCGACGT ACGCGGCGAG GTGCTGATGT TCAAGCGCGA TTTCGCACGC
CTGAACGAAC GCCAGCGCGC GGCCGAGCAG CGCGAATTCG CGAACCCGCG CAACGCAGCG
GCCGGCAGCC TGCGCCAGCT CGACTCGAAG ATCACCGCGC AGCGGCCGCT GTCGTTCTTC
GCGTACGGGA TCGGCGTGCT CGACGGGATG CCGATGCCCG ACACGCACAG CGCGCTGCTC
GACTGGTACG AGTCGCTCGG CCTGCCGGTG AATCGGGAGC GCGCGGTCGT GCACGGCGCC
GAAGGCTTGC TCGACTTCTT CCGCAAGGTC GGCGAGAAGC GCGAGTCGCT GCCGTACGAC
ATCGACGGCG TCGTCTACAA GGTCAACCGG CGCGACGAGC AGGAGCGGCT CGGCTTCGTG
TCGCGTGCGC CGCGCTTCGC GCTCGCGCAC AAGTTCCCCG CGCAGGAAGC GCTGACGAAG
CTCGTCGCGA TCGACGTGCA GGTCGGCCGC ACCGGTGCGA TCACGCCGGT CGCGCGTCTC
GAGCCGGTGT TCGTCGGCGG CGCGACCGTG ACCAATGCGA CGCTGCACAA CGAGGACGAA
GTGCGCCGCA AGGACATCCG GATCGGCGAC ACCGTGATCG TGCGGCGTGC GGGCGACGTG
ATTCCGGAAG TCGTCGGCGC GCTGCTCGAC CGGCGCCCGG CGGATGCGGC CGAATTCGTG
ATGCCGACCG AATGCCCGGT GTGCGGCTCG AAGATCGAGC GCCTGCCGGA CGAGGCGATC
GCGCGCTGCA CGGGCGGGCT GTTCTGCCCG GCGCAGCGCA AGCAGGCGCT GTGGCATTTC
GCGCAACGCC GCGCGCTCGA CATCGACGGC CTCGGCGAGA AGATCATCGA CCAGCTCGTC
GAGCTGAATC TCGTGCGCAC GCCGGCCGAC CTGTTCAATC TGGGCTTCGC GACGCTGGCC
GAACTCGACC GGTTCGCCGA GAAGTCCGCG CAGAACCTGA TCGATTCGCT CGAGAAGGCC
AAGCATACGA CGCTCGCGCG CTTCATCTAC GGGCTCGGCA TCCGCCATGT CGGCGAATCG
ACCGCGAAGG ATCTCGCGAA GCATTTCGGC TCGCTGACGC CGATCATGGA CGCGTCGATC
GAGGAACTGC TCGAAGTCAA CGACGTCGGG CCGATCGTGG CCGAGTCGCT CCACCAGTTC
TTCGCGGAGG AGCACAACCG GACCGTGATC GAGCAGTTGC GCGCGCCGGG CAAGGTCACG
TGGCCCGAAG GGCCGCCCGC GCCGAAGGCG CCGCAGGGCG TGCTGGCCGG CAAGACGGTC
GTGCTGACGG GCACGCTGCC GAATCTCACG CGCGATGCGG CGAAGGAGAT GCTCGAAGCG
GCGGGCGCGA AAGTGGCCGG TTCGGTGTCG AAGAAGACGG ATTACGTGGT CGCGGGCGCC
GAAGCCGGCA GCAAGCTCGC GAAGGCCGAG GAACTCGGCA TCCCCGTGCT GGACGAAGAT
GGTCTGCACC AACTCCTGGA GGGCAATACG CCATGA
 
Protein sequence
MARTQAEPPA SQPDARAAWL RDQLERANYA YYVLDQPDLP DAEYDRLFRE LQQLETDHPE 
LVTPDSPTQR VGGEAAGGFT PVVHDAPMLS LNNGFADEDI VAFDKRVADA LAKTTDLAGS
VTDPVEYACE LKFDGLAISL RYEQGVFVQA ATRGDGTTGE DVTENVRTIR SIPLKLKGKH
VPAVLDVRGE VLMFKRDFAR LNERQRAAEQ REFANPRNAA AGSLRQLDSK ITAQRPLSFF
AYGIGVLDGM PMPDTHSALL DWYESLGLPV NRERAVVHGA EGLLDFFRKV GEKRESLPYD
IDGVVYKVNR RDEQERLGFV SRAPRFALAH KFPAQEALTK LVAIDVQVGR TGAITPVARL
EPVFVGGATV TNATLHNEDE VRRKDIRIGD TVIVRRAGDV IPEVVGALLD RRPADAAEFV
MPTECPVCGS KIERLPDEAI ARCTGGLFCP AQRKQALWHF AQRRALDIDG LGEKIIDQLV
ELNLVRTPAD LFNLGFATLA ELDRFAEKSA QNLIDSLEKA KHTTLARFIY GLGIRHVGES
TAKDLAKHFG SLTPIMDASI EELLEVNDVG PIVAESLHQF FAEEHNRTVI EQLRAPGKVT
WPEGPPAPKA PQGVLAGKTV VLTGTLPNLT RDAAKEMLEA AGAKVAGSVS KKTDYVVAGA
EAGSKLAKAE ELGIPVLDED GLHQLLEGNT P