Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1922 |
Symbol | clpX |
ID | 4450439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2136957 |
End bp | 2138228 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639693968 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_835566 |
Protein GI | 116689943 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.069446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACA AAAAAGGTTC GAACAGCGAG AAGCTGTTGT ATTGCTCGTT TTGCGGGAAA AGCCAGCATG AGGTGAAAAA ACTCATCGCG GGCCCGTCGG TGTTCATCTG CGATGAATGT ATCGACCTCT GCAACGAAAT CATTCGCGAC GAGGCGGCTG CCGCCGGCGT CGAGGCCAGC CTGTCCCGGT CGGATCTGCC GAGCCCGCAG GAAATTCGCG ACATCCTCGA TCAGTACGTG ATCGGCCAGG AGCGCGCGAA GAAAATCCTC GCGGTGGCCG TGTACAACCA CTACAAGCGC CTGAAGCATC TCGACAAGAA GGACGACGTC GAGCTGTCGA AGAGCAACAT CCTGCTGATC GGCCCGACGG GCTCCGGCAA GACGCTGCTC GCGCAGACGC TCGCGCGGTT GCTCAACGTG CCGTTCGTGA TCGCCGACGC GACGACGCTG ACCGAAGCCG GCTACGTCGG CGAGGACGTC GAGAACATCA TCCAGAAGCT GTTGCAGAAC TGCAACTACG AGGTCGACAA GGCCCAGCGC GGGATCGTCT ACATCGACGA AATCGACAAG ATCAGCCGCA AGTCGGACAA CCCGTCGATC ACGCGCGACG TGTCGGGCGA GGGCGTCCAG CAGGCGCTGC TGAAGCTCGT CGAGGGCACG ATGGCGTCGG TGCCGCCGCA GGGCGGCCGC AAGCACCCGA ACCAGGATTT CATCCAGGTC GACACGACCA ACATCCTGTT CATCTGCGGC GGCGCGTTCG ACGGCCTCGA AAAGGTGATC ACCGATCGTA CCGAGAAGAC CGGCATCGGT TTCGGCGCGA CGGTCAAGAG CAAGCAGGAA CGCGACGCGG GCGAGGTGCT GCGCGAAACG GAACCGGAAG ACCTGATCAA ATTCGGTCTG ATCCCCGAAT TGATCGGCCG TCTGCCGGTG GTCGCGACGC TCGGCAAGCT CGACGAAGCT GCGCTGATGA AGATCCTGGT CGAGCCGAAG AATGCGCTCG TCAAGCAGTA TCACAAGCTG TTCGCGATGG AGCGCGTCGA GCTGGAGATC CGGCCGGGCG CGTTGCAGGC AGTCGCCCGC AAGGCGATCC GCCGCAAGAC CGGCGCGCGC GGTTTGCGTT CGATCATCGA ACAGGCATTG CTCGACGTGA TGTACGAGCT GCCGACGATG AAAGGGGTCA GCAAGGTCAT CATCGACGAG AACGTCATCG ATGGGGACGG CAAGCCCTTG CTGATCTACG AGGACACGCC GAAGGTGGCG GGTTCGAACT GA
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Protein sequence | MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAAAGVEAS LSRSDLPSPQ EIRDILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDDV ELSKSNILLI GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVDKAQR GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV DTTNILFICG GAFDGLEKVI TDRTEKTGIG FGATVKSKQE RDAGEVLRET EPEDLIKFGL IPELIGRLPV VATLGKLDEA ALMKILVEPK NALVKQYHKL FAMERVELEI RPGALQAVAR KAIRRKTGAR GLRSIIEQAL LDVMYELPTM KGVSKVIIDE NVIDGDGKPL LIYEDTPKVA GSN
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