Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1831 |
Symbol | |
ID | 4447912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2033771 |
End bp | 2035327 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693875 |
Product | major facilitator transporter |
Protein accession | YP_835475 |
Protein GI | 116689852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0091449 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGG TGCCGGGCCG GCCGCCGCTG TGGAGCCGCG CAAACCTGCG GGGGGACCTG TTCCCGTGGG CACTCGCGCT CGTCACCGGC ATCGACTACT TCGACAACGC CGTCTTCTCG TTCTTCGCGA GCTACATCGC GGGCGGCATC AACGCGTCGC CCGACGAACT GGTGTGGTCG TCGAGCGCGT ACGCGGTCAC GGCCGTGCTC GGCATCCTGC AGCAGCAATG GTGGGTCGAC CGGCTCGGCC ATCGCCGCTA CGTCGCGGGC TGCATGCTGA TGTTCTCGTT CGGCGCGATC GCGGCGGCGC TGGCCGACAC GTCGCTGGAG CTCGCGTTCG CGCGCGGCTT CCAGGGCTAT TTCATCGGCC CGATGATGGG CGCGTGCCGG ATCCTGATCC AGATCAGCTT CAAGCCGCAG GAGCGGCCGC CCGCGACGCG CGCGTTCCTG ATCATGATCC TGCTCGGCAG CGCGCTCGCG CCGATCGTCG GCGGGCTGCT GGTCGCGCAT TCGACGTGGC GCGCACTGTT CGCGTGCACG GCGCCGGCCG GCATCGCGTT CGCGATCCTC GCGTTGCTCA CGCTGCCCGA TTCCGGCCGC ACGCCGGACG ACGAACGCGG TTCCGGACAT TTCTGGCCGT ACGTCGTGTT CGCGCTCGCG CAAGGGGCGC TGCAGATCGT GCTGCAACAG GTGCATTACC AGCTCTACAG CGGCTCGCCG ATGCTGATCA TGCTGACGTT CGCCGGGCTC GGCGCGCTCG CGTGGTTCGC GTATCACCAG TGGCACCATC CGACGCCGCT CGTGCGGCTG CATGCGTTTC GCGAGCGGAC GTTCCAGGTC GGGCTGCTGC TCTACATGTT CTATTACTAC GAGACGACGG GCTTCAGTTA CCTGACGTCC CGGTTACTCG AGGGCGGGCT CGGCTATCCG GTCGAGAATG CCGGGCGCCT GGTCGGCACG ATGTCGCTGA TCTCGGCCAC CGCGCTGTTC GCCTACCTGC GCTACGCGAA ATTCGTCGCG CACAAGAAGT GGTTCGTCGT GCCCGGGTTC GCGATCGCCG TCACGGCCGC GCTGTGGATG ACCCGGATGA CGCCGCAGAT CGGCGAAGCC GCGCTGATCG TCCCGTTGCT GCTGCGCGGG CTGCTGCTGC TCTTCATCGT GCTGCCGGTC GCGAATCTCA CGTTCCGGAT CTTCGCGATC GACGAATACA CGCACGGCTA CCGGCTGAAG AACATCGTGC GGCAACTGAC GATCTCGTTC GCGACGTCGT CGGTGATCAT CGTCGAGCAG CACCGCGTGG CCGTGCACCA GACGCGGCTC GTCGAGCGCG CGAGCGTGTT CGACCCGCTG TTCCAGCAGA CCGTCGATGC ACTGACGCGC AGCTATGCGG CCGCCGGCCA CGCGCTGAAC GACGCGCACG GCCTCGCGAT CGCGTCGATC GCGCGGATGG TCGCGCAACA GGCGTCGTTC CTCGCGTCGC TCGACGGTTT TTACTTCCTC GCGGGCGTCG CGCTCGTCGG CGGTCTCTTC GCGGCATGGC AAAAACAGAT CGATTGA
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Protein sequence | MNAVPGRPPL WSRANLRGDL FPWALALVTG IDYFDNAVFS FFASYIAGGI NASPDELVWS SSAYAVTAVL GILQQQWWVD RLGHRRYVAG CMLMFSFGAI AAALADTSLE LAFARGFQGY FIGPMMGACR ILIQISFKPQ ERPPATRAFL IMILLGSALA PIVGGLLVAH STWRALFACT APAGIAFAIL ALLTLPDSGR TPDDERGSGH FWPYVVFALA QGALQIVLQQ VHYQLYSGSP MLIMLTFAGL GALAWFAYHQ WHHPTPLVRL HAFRERTFQV GLLLYMFYYY ETTGFSYLTS RLLEGGLGYP VENAGRLVGT MSLISATALF AYLRYAKFVA HKKWFVVPGF AIAVTAALWM TRMTPQIGEA ALIVPLLLRG LLLLFIVLPV ANLTFRIFAI DEYTHGYRLK NIVRQLTISF ATSSVIIVEQ HRVAVHQTRL VERASVFDPL FQQTVDALTR SYAAAGHALN DAHGLAIASI ARMVAQQASF LASLDGFYFL AGVALVGGLF AAWQKQID
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