| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1793 |
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| Symbol | |
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| ID | 4450562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1990987 |
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| End bp | 1992195 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639693837 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_835437 |
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| Protein GI | 116689814 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT CAAGTTCGCA GAATGCCCAG CCGGGCACAC CAAATCGCGA AGATTATAGC
CCAAGCGATC GGCCCGCCGA CGCTGCGTCG GGGGATTCCC TCGATGACGA TCTGGCCGGC
GACGCGATGC AGCCGCCCGT CGTGCCGTCC GCGGCGGTCG ACGAGGCGCC GCGCGTCGTC
GAAGTGCCGC TGTCGCTCGC GGGTGAACGC CTCGACAAGG CGCTTGCCCA ACTGTTCCCC
GAATTCTCGC GCAGCCGCCT GCAGAGCTGG ATCGAGGCGC AGCGCGTGCT CGTCGACGGC
GCGCCGGCGA AGATCCGTCA GCCGGTGCCG CTCGGCGCGA AGATCGCGCT CGTGCCCGAT
CTGTTGCCCG AGCAGCTCGC GTTCACGCCG GAGCCCGTGC CGCTCGACGT GATCTACGAG
GACGACGCAC TCGTCGTCAT CAACAAGCCG GCCGGCCTCG TCGTGCATCC GGCCGCCGGC
AACTGGAGCG GCACGATCCT CAACGGTCTG CTGCATCGCT ACGGCGACGC GGCCGCCGGC
CTGCCGCGCG CGGGGATCGT CCACCGGCTC GACAAGGAAA CCTCCGGCCT GATGGTGGTC
GCCCGCACGC TGGCCGCGCA GACCGACCTC GTGCGTCAGC TGCAGGCCCG CACGGTGAAG
CGCCGCTATT TCGCGCTCGT GTGGGGCACG ATGCCCGAGG AGGGCACGAT CGACGCGCCG
ATCGGCCGCG ATCCGCGCGA ACGCACGCGC ATGGCCGTCG TCACCGGCGC GTCGGGCAAG
CCCGCTCGCA CGCATTTCCG CACGGTTGAC ACATGCCTGT GGCAACGTCA GCCGGTTTCG
GCGATTCAGT GCGATCTCGA AACCGGCCGC ACGCACCAGA TCCGCGTGCA CTGCGCGCAC
GCCGGGCATC CGCTGCTCGG CGATCCGGTC TACGGGCGTG CGCGCGGCAA GCGCTCGGTC
ACGCCGCTGC CGGACGGGTT CGCACGACAG GCGCTGCATG CGTGGCGGCT CGGCCTCGTG
CATCCGGTCA CGGGCAAGGC GATGCAGTGG CGCTGCCCGC TGCCGGACGA CATGAACACG
CTGGTCGCCG CGCTGGGCTT CGGGCAGGGC GACGAGGAAT TCGACGACGA CGACGGTGTC
TACGACGATG ACGACTTCGG CGGCGAGTAT CACGACGACG AGCCGTACCT GGACGACGAG
GAGGAGTGA
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| Protein sequence | MTRSSSQNAQ PGTPNREDYS PSDRPADAAS GDSLDDDLAG DAMQPPVVPS AAVDEAPRVV
EVPLSLAGER LDKALAQLFP EFSRSRLQSW IEAQRVLVDG APAKIRQPVP LGAKIALVPD
LLPEQLAFTP EPVPLDVIYE DDALVVINKP AGLVVHPAAG NWSGTILNGL LHRYGDAAAG
LPRAGIVHRL DKETSGLMVV ARTLAAQTDL VRQLQARTVK RRYFALVWGT MPEEGTIDAP
IGRDPRERTR MAVVTGASGK PARTHFRTVD TCLWQRQPVS AIQCDLETGR THQIRVHCAH
AGHPLLGDPV YGRARGKRSV TPLPDGFARQ ALHAWRLGLV HPVTGKAMQW RCPLPDDMNT
LVAALGFGQG DEEFDDDDGV YDDDDFGGEY HDDEPYLDDE EE
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