Gene Bcen2424_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1711 
Symbol 
ID4449239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1904112 
End bp1906937 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content61% 
IMG OID639693756 
ProductTonB-dependent receptor 
Protein accessionYP_835356 
Protein GI116689733 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA GAGTTTTGGC GTTGGCCATC AAGAGGATGG TTTGGGCGGA ACTGGCGCTG 
ACGGCCGCGC TGGTGCCGCC GGCGTTCGCC CAGAGCCAGC CGGCGCCGGG CGCCGCATCG
ATTGCGGATG CGGTCGCGAA CGGGGCCTCC ATGACCGTTG CACAGGCGGA CGGTGCGGCG
GGCGCTGTCG CTGCCACGGG TGCCTCGGCA TCCGGTGCGG CAGCCGAGGC GACGCCTGCA
GCGTCCGGCG CGAACGGACA GGGCAAGGTC GCGCAGATCA AGCGGTTCGA AGTGACGGGT
TCGCTGATCC GACAGGCCGA CAAGGTGGGC TTCAACCAGG TTCAGACCGT CACGAGCAAG
GACATCGAGA ACAGCGGTCA GACCAGCGTC GCTGACTACC TGCGCAGCAC CTCGGCGAAC
TCGGCAAGTA GCTGGAGCGA AGGTTCGACG AACAGCTTCG CACCGGGCGG CGCAGGTATT
GCGCTGCGCG GTCTTAGCGA GAAATACACG CTGGTGCTGA TCGACGGCAT GCGGGTGTCG
CCGTATGCGT TCGCAGTGAA TGGCAGCGAT CAGTTCTTCG ACCTGAACAC GCTGCCGCTC
AACATCATCG ACCGTATCGA AATTGTCAAG ACAGGCGCGG TGTCTCAGTA TGGTTCCGAC
GCAATCGCGG GCGTGGTGAA CATCATCACG AAGAAAAATT TTCAGGGTCT TGAATTGGGG
GGCAGCTACG GTGGTGCGAC GAATGGCGAA GGCGGCCAGG GCACGACGAA GTTCAGCATC
CTGGGCGGCT TCGGCGACCT GAACGCCGAC CGTTTCAACG TGACCGCAGC GCTCAGCTAC
TACAAGTCGA ACGGCATCTC GATCGCCGAT CGCGATACGA CGCAGAACCA GAACTTCTCC
AATTTCCCGG GCGGCCTGTC GAACCAGAGC GTGTCGTACT GGCGCAATCC GGCCACCGGC
GCGAAGGTGC CGCTGAGCCC GTGTCCGAAC GGAGGCCAAG CCGTGCCGGG CACCTCCGTT
GCGCAGGTCA ACGGTCCCGG CACGGTCTGC GCAAACAACA CCGCGTACGC ATCGTCGCTG
TCGCCGTGGA CTGAACGCCT GAGCGCGAAG GTGCATGCCG ACTTCAAGAT CAACGACGCG
ATGCAGGCGT TCGCCGATCT CTGGGAAAGC AACAATACGA CGGTCACGAA CAACTTCGTC
GGCCGCCTCG GCAACAGCAC GCAGACCTAT GATCCGGCGA CGGGCGGTCT CACCCCGATC
TCGAACCTGG TGCCGGGCAG CAACCCGTAT AACCCGTTTG GCGTGCCGGC CAAGCTGGTC
TATGCATTCC CGGCCACGCA GGCCGTGCAT ACGAGCTCCA ACTTCTGGCG TGCCGCGACG
GGTGTGAAAG GCTCGTTCAG CACGCCACGC GTGGGTGATT GGGATTGGAC AGCGTCCTAC
ACGCATTCGC AGAACACGGT TTCGAACAAC TATTCGAACC TGATCAACGC GGCCGCGCTG
GAAAATGTTG TGCAGAACGG CGTGTTCAAC TTCGCCGATC CATCGTCGAC CCCGAACGGG
TTGAACGGGT TGTACGGAAG CACGTCTACA CAGGCCATCA CGAAGCTCGA CGCCGTCGAC
GCGACGCTGT CTACGCCGAA CCTGTTCACG TTGCCCACGG GCAACGTCGG CCTGGGTCTC
GGTACGCAAT TCACGCACCA GAGCCAGTAC ATCGGTACGG GTGCGGACTA CGCGAACGGC
ACGCTCATCC AGCCGTCGCT GCAATCGGTC AACGGCGAGC GCAACGTCGC GGCGGTCTAC
TACCAGATCG ACATTCCTAT CCTGAAGAAC TTGACGTTCA GCCAGTCGGG GCGCTACGAC
CACTACAGTG ACTTCGGCGG AGCGTTCTCG CCGCGCTTCG CGTTGCGCTT CCAGCCGATC
CGCGAACTGA CGATGTACGG TTCGTACAAC CGTGGCTTCC GCGCACCGAC GCTGATCGAA
AACACCTCGT CGAGGACCTA CGGCGCGCAG GGCGCGGTCG ATTCGAACGA TCCTAACAAC
CCGAACGCAT ACAACCTCGT TGAGGAAGTG CAGACCGGTA ACAGCAAGCT GCAGCCGGAG
CGGACCAAGA ACTACAACAT CGGCTTCCAG CTGTCGCCCA CCCGCAATAC CGATTTCGGC
TTCGACTGGT ACAAGATCCA CATCGACAAC GTGATTGGCA CGGAAGACAT CCAGACGGTG
ATCGACCAGA ATGATCCATC GAAGGTGATC CGTAACCCGA ACGGCACGAT CGCATATGTG
CTGCTGCCGT ATATGAACCT CTCGTCGCTC GATACGGATG GCTTCGAGAC CACCTTCCGC
CAATCGGTGT CGACCAAGAT CGGCACTTTC ACGCTGTCGG GTGACTGGGC CTACGTGTGG
CACTTCAAGA TGCCGGTGGG CGGCGAGTCG ACCGACTTCG CGGGCAACAA CGGGTCGCTG
AACGAGCCGT TCGGCGGCAG TTTCCCGCGC TGGAAGGGCA ACACGAGTCT GAACTGGAAC
TACCACAACC AATGGAACGC GACGTTGACG TGGATGTTCA CGGGGCCGTA CAGCCAGGCC
ATCCTGTCGC CGGGCCAATA TCCGAACATG CAGGACAGCG TGGCTTCGTA CAGTCAGTTC
AACCTGATGG TCAGCTACAC CGGCTTCAAG CACTGGACGA TCTACGCGGG CATCGACAAC
ATCTTCAATC GTGCGCCGCC GTTCGACCCG GTTTATATGA ACGCGAGCTA CCAGACGGGC
TACGACACGT CGCTGTACAC GTATGTCGGT CGATTCGCTC AGGTGGGCGC GACCTACAAG
TTCTGA
 
Protein sequence
MKQRVLALAI KRMVWAELAL TAALVPPAFA QSQPAPGAAS IADAVANGAS MTVAQADGAA 
GAVAATGASA SGAAAEATPA ASGANGQGKV AQIKRFEVTG SLIRQADKVG FNQVQTVTSK
DIENSGQTSV ADYLRSTSAN SASSWSEGST NSFAPGGAGI ALRGLSEKYT LVLIDGMRVS
PYAFAVNGSD QFFDLNTLPL NIIDRIEIVK TGAVSQYGSD AIAGVVNIIT KKNFQGLELG
GSYGGATNGE GGQGTTKFSI LGGFGDLNAD RFNVTAALSY YKSNGISIAD RDTTQNQNFS
NFPGGLSNQS VSYWRNPATG AKVPLSPCPN GGQAVPGTSV AQVNGPGTVC ANNTAYASSL
SPWTERLSAK VHADFKINDA MQAFADLWES NNTTVTNNFV GRLGNSTQTY DPATGGLTPI
SNLVPGSNPY NPFGVPAKLV YAFPATQAVH TSSNFWRAAT GVKGSFSTPR VGDWDWTASY
THSQNTVSNN YSNLINAAAL ENVVQNGVFN FADPSSTPNG LNGLYGSTST QAITKLDAVD
ATLSTPNLFT LPTGNVGLGL GTQFTHQSQY IGTGADYANG TLIQPSLQSV NGERNVAAVY
YQIDIPILKN LTFSQSGRYD HYSDFGGAFS PRFALRFQPI RELTMYGSYN RGFRAPTLIE
NTSSRTYGAQ GAVDSNDPNN PNAYNLVEEV QTGNSKLQPE RTKNYNIGFQ LSPTRNTDFG
FDWYKIHIDN VIGTEDIQTV IDQNDPSKVI RNPNGTIAYV LLPYMNLSSL DTDGFETTFR
QSVSTKIGTF TLSGDWAYVW HFKMPVGGES TDFAGNNGSL NEPFGGSFPR WKGNTSLNWN
YHNQWNATLT WMFTGPYSQA ILSPGQYPNM QDSVASYSQF NLMVSYTGFK HWTIYAGIDN
IFNRAPPFDP VYMNASYQTG YDTSLYTYVG RFAQVGATYK F