Gene Bcen2424_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1520 
Symbol 
ID4448798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1681020 
End bp1681925 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID639693560 
ProductFlp pilus assembly CpaB 
Protein accessionYP_835165 
Protein GI116689542 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000592722 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACA ACCTGACGAA GATCATTGCG GGCTTGCTGA TCGCGATCGC GATCCTGCTC 
GGCGTCTATG CGTGGATGCT CGGTCGCAAG CCGGCCGACG TCGCGCCGGT TGCCGCGACG
GTCGCGACGC AGAGCGTGCC GGTCGTTGTG ACGACGCGGC CGTTGCAAGC CGGCCAGCCG
ATTCCGGCCG AGGCGCTGAA GGTGCAGCAG TCGACCGCCG CGCCGCAGGG CGCGTTCGCC
GATCCGCTGC AACTGGTTGG CCGCATTCCG GCAGCCGATA TTCCCGCGCA GGCGGCCGTC
GTCGCGAGCG CCTTGTCGTC CGGCCTCGCC GAGCAGCTCG CACCGGGAGA GCGTGCCGTC
GCGATCAAGG TCGACGAGAC CAATGCGGTC GGCAACCGCG TGCGGCCCGG CAACTATGTC
GACGTGTTCC TGAACCTGAA GCGCGACGGG ACCGGCGTGG CGATCGGCGG GACGTCGACG
GCGGAGATCG TGAATACCCA GGCGCGGCTG CTGATGTCGA AGGTCCGCGT GCTGTCGTTC
GGCGATGCGA CGACCGAGCG CGACAGCTCG AACGGCTCGG TGGTCGGGAC GCGGACCGCG
GTGCTGGCGG TGCCGACCGC GCAGGTGGAT GCGCTGACGC TCGCCGAACA GAGCGGCCGG
CTCGTGCTCG CGCTGCGTAG CCCGCGCGAC GAAGATGTCG CGACGCAAAC CGTCGCGGTC
CGTGTCGGCG ACGACAAGAG CCCGTCGGCG CTTGCCGCGG CGGGCGTGGT GCTGGGCGAG
TTGTCGAAGA GCGCGACGAC GGCGGCACCG GCCCCGCGTG CGGCGCCGCG GGTGGTCGCG
CGGCATCCGA GCGGCGGCAG CATCGAAGTG ATTCGGGGTG GGCGGACCGA AACGGTCGCT
TATTGA
 
Protein sequence
MANNLTKIIA GLLIAIAILL GVYAWMLGRK PADVAPVAAT VATQSVPVVV TTRPLQAGQP 
IPAEALKVQQ STAAPQGAFA DPLQLVGRIP AADIPAQAAV VASALSSGLA EQLAPGERAV
AIKVDETNAV GNRVRPGNYV DVFLNLKRDG TGVAIGGTST AEIVNTQARL LMSKVRVLSF
GDATTERDSS NGSVVGTRTA VLAVPTAQVD ALTLAEQSGR LVLALRSPRD EDVATQTVAV
RVGDDKSPSA LAAAGVVLGE LSKSATTAAP APRAAPRVVA RHPSGGSIEV IRGGRTETVA
Y